SBGrid Data Bank

Datasets: 848	Lab/Institutional Collections: 848	Next Update: Tuesday 5pm

Datasets: 848	Lab/Institutional Collections: 848	Next Update: Tuesday 5pm

X-Ray Diffraction data from E. coli class Ia ribonucleotide reductase dATP inhibited complex bound to CDP and dATP, source of 5CNS structure

Native data set collected in two wedges

Data DOI: 10.15785/SBGRID/236 | PDB ID 5CNS: RCSB PDBe | Publication DOI: 10.7554/eLife.07141 | Published: 25 Mar 2016

Drennan Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/236
PDB ID 5CNS: RCSB PDBe
Publication DOI: 10.7554/eLife.07141

Drennan Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from Pseudomonas aeruginosa PAO1 protein PA0091, source of 4MTK structure

Best native dataset

Data DOI: 10.15785/SBGRID/235 | PDB ID 4MTK: RCSB PDBe | Published: 22 Apr 2016

Leiman Laboratory, École Polytechnique Fédérale de Lausanne

Data DOI: 10.15785/SBGRID/235
PDB ID 4MTK: RCSB PDBe

Leiman Laboratory, École Polytechnique Fédérale de Lausanne

X-Ray Diffraction data from Sec7 (T. terrestris) DCB/HUS domain, source of 5HAS structure

Native dataset

Data DOI: 10.15785/SBGRID/234 | PDB ID 5HAS: RCSB PDBe | Publication DOI: 10.7554/eLife.12411 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/234
PDB ID 5HAS: RCSB PDBe
Publication DOI: 10.7554/eLife.12411

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Sec7 (T. terrestris) DCB/HUS domain, source of 5HAS structure

SAD data of SeMet protein crystals. Data was collected in 10-image wedges using an inverse beam strategy.

Data DOI: 10.15785/SBGRID/233 | PDB ID 5HAS: RCSB PDBe | Publication DOI: 10.7554/eLife.12411 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/233
PDB ID 5HAS: RCSB PDBe
Publication DOI: 10.7554/eLife.12411

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Snf7 core (ESCRT-III filament), source of 5FD9 structure

Data collected on Snf7 filament crystals after high-pressure freezing.

Data DOI: 10.15785/SBGRID/232 | PDB ID 5FD9: RCSB PDBe | Publication DOI: 10.7554/eLife.12548 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/232
PDB ID 5FD9: RCSB PDBe
Publication DOI: 10.7554/eLife.12548

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Snf7 core (ESCRT-III filament), source of 5FD7 structure

Data collected on the Snf7 ESCRT-III filament at ambient pressure

Data DOI: 10.15785/SBGRID/231 | PDB ID 5FD7: RCSB PDBe | Publication DOI: 10.7554/eLife.12548 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/231
PDB ID 5FD7: RCSB PDBe
Publication DOI: 10.7554/eLife.12548

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Bacteroides fragilis fragipain protease, source of 5DYN structure

native dataset collected from single crystal of B. fragilis fragipain protease

Data DOI: 10.15785/SBGRID/225 | PDB ID 5DYN: RCSB PDBe | Publication DOI: 10.1038/nm.4077 | Published: 8 Mar 2016

Crosson Laboratory, University of Chicago

Data DOI: 10.15785/SBGRID/225
PDB ID 5DYN: RCSB PDBe
Publication DOI: 10.1038/nm.4077

Crosson Laboratory, University of Chicago

Micro-Electron Diffraction data from alpha-synuclein, source of 4RIL structure

Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction.

Data DOI: 10.15785/SBGRID/223 | PDB ID 4RIL: RCSB PDBe | Publication DOI: 10.1038/nature15368 | Published: 4 Mar 2016

Gonen Laboratory, University of California, Los Angeles

Data DOI: 10.15785/SBGRID/223
PDB ID 4RIL: RCSB PDBe
Publication DOI: 10.1038/nature15368

Gonen Laboratory, University of California, Los Angeles

Micro-Electron Diffraction data from Lysozyme, source of 3J6K structure

Lysozyme microcrystals

Data DOI: 10.15785/SBGRID/222 | PDB ID 3J6K: RCSB PDBe | Publication DOI: 10.1038/nmeth.3043 | Published: 4 Mar 2016

Gonen Laboratory, University of California, Los Angeles

Data DOI: 10.15785/SBGRID/222
PDB ID 3J6K: RCSB PDBe
Publication DOI: 10.1038/nmeth.3043

Gonen Laboratory, University of California, Los Angeles

Template-based Haddock models

THIS DATA IS ORIGINALLY USED IN XUE ET AL., BRIEFINGS IN BIOINFORMATICS, 2016: TEMPLATE-BASED PROTEIN-PROTEIN DOCKING EXPLOITING PAIRWISE INTERFACIAL RESIDUE RESTRAINTS by Li C Xue, Joao P.G.L.M. Rodrigues, Drena Dobbs, Vasant Honavar, Alexandre M.J.J. Bonvin

Data DOI: 10.15785/SBGRID/221 | Publication DOI: 10.1093/bib/bbw027 | Published: 9 Mar 2016

Bonvin Laboratory, Utrecht University

Data DOI: 10.15785/SBGRID/221
Publication DOI: 10.1093/bib/bbw027

Bonvin Laboratory, Utrecht University

X-Ray Diffraction data from CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7, source of 4YGA structure

SeMet dataset.

Data DOI: 10.15785/SBGRID/220 | PDB ID 4YGA: RCSB PDBe | Publication DOI: 10.1073/pnas.1505914112 | Published: 15 Jan 2016

Schwartz Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/220
PDB ID 4YGA: RCSB PDBe
Publication DOI: 10.1073/pnas.1505914112

Schwartz Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7 , source of 4YGA structure

Native data.

Data DOI: 10.15785/SBGRID/219 | PDB ID 4YGA: RCSB PDBe | Publication DOI: 10.1073/pnas.1505914112 | Published: 15 Jan 2016

Schwartz Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/219
PDB ID 4YGA: RCSB PDBe
Publication DOI: 10.1073/pnas.1505914112

Schwartz Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from selenomethionyl neurexin 1alpha ectodomain, source of 3QCW structure

selenomethionyl neurexin 1alpha ectodomain

Data DOI: 10.15785/SBGRID/218 | PDB ID 3QCW: RCSB PDBe | Publication DOI: 10.1016/j.str.2011.03.012 | Published: 12 Jan 2016

Rudenko Laboratory, University of Texas Medical Branch

Data DOI: 10.15785/SBGRID/218
PDB ID 3QCW: RCSB PDBe
Publication DOI: 10.1016/j.str.2011.03.012

Rudenko Laboratory, University of Texas Medical Branch

X-Ray Diffraction data from Prefusion RSV F Glycoprotein Fusion Inhibitor Resistance Mutant D489Y, source of 5EA8 structure

Native dataset

Data DOI: 10.15785/SBGRID/217 | PDB ID 5EA8: RCSB PDBe | Publication DOI: 10.1038/nchembio.1982 | Published: 8 Jan 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/217
PDB ID 5EA8: RCSB PDBe
Publication DOI: 10.1038/nchembio.1982

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor BMS-433771, source of 5EA7 structure

Native dataset

Data DOI: 10.15785/SBGRID/216 | PDB ID 5EA7: RCSB PDBe | Publication DOI: 10.1038/nchembio.1982 | Published: 8 Jan 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/216
PDB ID 5EA7: RCSB PDBe
Publication DOI: 10.1038/nchembio.1982

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor BTA-9881, source of 5EA6 structure

Native dataset

Data DOI: 10.15785/SBGRID/215 | PDB ID 5EA6: RCSB PDBe | Publication DOI: 10.1038/nchembio.1982 | Published: 8 Jan 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/215
PDB ID 5EA6: RCSB PDBe
Publication DOI: 10.1038/nchembio.1982

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor TMC-353121, source of 5EA5 structure

Native dataset

Data DOI: 10.15785/SBGRID/214 | PDB ID 5EA5: RCSB PDBe | Publication DOI: 10.1038/nchembio.1982 | Published: 8 Jan 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/214
PDB ID 5EA5: RCSB PDBe
Publication DOI: 10.1038/nchembio.1982

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-49153390, source of 5EA4 structure

Native dataset

Data DOI: 10.15785/SBGRID/213 | PDB ID 5EA4: RCSB PDBe | Publication DOI: 10.1038/nchembio.1982 | Published: 8 Jan 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/213
PDB ID 5EA4: RCSB PDBe
Publication DOI: 10.1038/nchembio.1982

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-2408068, source of 5EA3 structure

Native dataset

Data DOI: 10.15785/SBGRID/212 | PDB ID 5EA3: RCSB PDBe | Publication DOI: 10.1038/nchembio.1982 | Published: 8 Jan 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/212
PDB ID 5EA3: RCSB PDBe
Publication DOI: 10.1038/nchembio.1982

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from KRIT1 ARD-FERM, source of 5D68 structure

180°, 1° oscillations.

Data DOI: 10.15785/SBGRID/211 | PDB ID 5D68: RCSB PDBe | Publication DOI: 10.1016/j.jsb.2015.10.006 | Published: 5 Jan 2016

Boggon Laboratory, Yale University School of Medicine

Data DOI: 10.15785/SBGRID/211
PDB ID 5D68: RCSB PDBe
Publication DOI: 10.1016/j.jsb.2015.10.006

Boggon Laboratory, Yale University School of Medicine