Data DOI: 10.15785/SBGRID/243 | ID: 243
5EQ4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Iverson Laboratory, Vanderbilt University
Release Date: April 1, 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/243
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/243 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/243 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/243 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/243 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 243 ; shasum -c files.sha'
Storage requirements: 12G
Biological Sample:
SrpA R34E variant
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 21-ID-G
Data Creation Date:
Aug. 22, 2015
Related Datasets:
None
Loukachevitch, LV; Iverson, TM. 2016. "X-Ray Diffraction data for: SrpA R34E variant. PDB Code 5EQ4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/243.
point mutant that wrecks ligand binding
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Tina M Iverson | Depositor | Vanderbilt |
| Lioudmila V Loukachevitch | Data Collector | Vanderbilt |
| Tina Iverson | PI | Vanderbilt University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/243/srpasur347e_cr28_1_1_10.###
Images:
1 - 360
Beam:
(145.37, 155.42) -> (145.37, 155.49)
Distance:
350.0 -> 349.12
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.03 | 5.51 | 2.03 |
| Low resolution limit | 40.79 | 40.79 | 2.07 |
| Completeness | 86.9 | 100.0 | 45.0 |
| Multiplicity | 13.0 | 12.8 | 8.3 |
| I/sigma | 15.5 | 42.0 | 1.0 |
| Rmerge | 0.121 | 0.042 | 1.912 |
| CC half | 0.999 | 0.999 | 0.32 |
| Anomalous completeness | 87.2 | 99.7 | 46.3 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 44.71 | 87.98 | 199.1 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/243/srpasur347e_cr28_1_1_10.###
Images:
1 - 360
Beam:
(145.37, 155.42) -> (145.37, 155.5)
Distance:
350.0 -> 349.4
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.03 | 5.51 | 2.03 |
| Low resolution limit | 43.63 | 43.64 | 2.07 |
| Completeness | 86.9 | 100.0 | 44.7 |
| Multiplicity | 13.0 | 12.8 | 8.3 |
| I/sigma | 15.5 | 41.9 | 1.0 |
| Rmerge | 0.121 | 0.042 | 1.895 |
| CC half | 0.999 | 0.999 | 0.333 |
| Anomalous completeness | 87.2 | 99.7 | 46.0 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 44.72 | 87.98 | 199.11 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/243/srpasur347e_cr28_1_1_10.###
Images:
1 - 360
Beam:
(145.37, 155.42) -> (145.37, 155.59)
Distance:
350.0 -> 348.96
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.2 | 5.98 | 2.2 |
| Low resolution limit | 66.43 | 66.46 | 2.24 |
| Completeness | 96.0 | 100.0 | 68.0 |
| Multiplicity | 13.7 | 13.0 | 10.0 |
| I/sigma | 8.0 | 27.4 | 1.1 |
| Rmerge | 0.178 | 0.079 | 0.895 |
| CC half | 0.778 | 0.997 | 0.457 |
| Anomalous completeness | 96.6 | 100.0 | 70.7 |
| Anomalous multiplicity | 7.3 | 7.3 | 7.3 |
| Cell | 44.75 | 88.079 | 199.297 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
