SBGrid Data Bank

Datasets: 836	Lab/Institutional Collections: 836	Next Update: Tuesday 5pm

Datasets: 836	Lab/Institutional Collections: 836	Next Update: Tuesday 5pm

X-Ray Diffraction data from Protective Ebola Virus Antibody 100, source of 5FHB structure

Native dataset

Data DOI: 10.15785/SBGRID/249 | PDB ID 5FHB: RCSB PDBe | Publication DOI: 10.1126/science.aad6117 | Published: 1 Apr 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/249
PDB ID 5FHB: RCSB PDBe
Publication DOI: 10.1126/science.aad6117

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from Protective Ebola Virus Antibody 114, source of 5FHA structure

Native dataset

Data DOI: 10.15785/SBGRID/248 | PDB ID 5FHA: RCSB PDBe | Publication DOI: 10.1126/science.aad6117 | Published: 1 Apr 2016

McLellan Laboratory, University of Texas at Austin

Data DOI: 10.15785/SBGRID/248
PDB ID 5FHA: RCSB PDBe
Publication DOI: 10.1126/science.aad6117

McLellan Laboratory, University of Texas at Austin

X-Ray Diffraction data from SrpA R34E variant, source of 5EQ4 structure

point mutant that wrecks ligand binding

Data DOI: 10.15785/SBGRID/243 | PDB ID 5EQ4: RCSB PDBe | Published: 1 Apr 2016

Iverson Laboratory, Vanderbilt University

Data DOI: 10.15785/SBGRID/243
PDB ID 5EQ4: RCSB PDBe

Iverson Laboratory, Vanderbilt University

X-Ray Diffraction data from SrpA + Neu5Gc-Gal disaccharide, source of 5EQ3 structure

data with bound ligand

Data DOI: 10.15785/SBGRID/242 | PDB ID 5EQ3: RCSB PDBe | Published: 1 Apr 2016

Iverson Laboratory, Vanderbilt University

Data DOI: 10.15785/SBGRID/242
PDB ID 5EQ3: RCSB PDBe

Iverson Laboratory, Vanderbilt University

X-Ray Diffraction data from SrpA, source of 5EQ2 structure

SrpA (unliganded) in space group C2

Data DOI: 10.15785/SBGRID/241 | PDB ID 5EQ2: RCSB PDBe | Published: 1 Apr 2016

Iverson Laboratory, Vanderbilt University

Data DOI: 10.15785/SBGRID/241
PDB ID 5EQ2: RCSB PDBe

Iverson Laboratory, Vanderbilt University

X-Ray Diffraction data from E. coli class Ia ribonucleotide reductase dATP inhibited complex bound to GDP and TTP, source of 5CNV structure

Native data set

Data DOI: 10.15785/SBGRID/240 | PDB ID 5CNV: RCSB PDBe | Publication DOI: 10.7554/eLife.07141 | Published: 25 Mar 2016

Drennan Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/240
PDB ID 5CNV: RCSB PDBe
Publication DOI: 10.7554/eLife.07141

Drennan Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from E. coli class Ia ribonucleotide reductase dATP inhibited complex bound to ADP and dGTP, source of 5CNU structure

Native data set

Data DOI: 10.15785/SBGRID/239 | PDB ID 5CNU: RCSB PDBe | Publication DOI: 10.7554/eLife.07141 | Published: 25 Mar 2016

Drennan Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/239
PDB ID 5CNU: RCSB PDBe
Publication DOI: 10.7554/eLife.07141

Drennan Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from E. coli class Ia ribonucleotide reductase dATP inhibited complex bound to UDP and dATP, source of 5CNT structure

Native data set

Data DOI: 10.15785/SBGRID/238 | PDB ID 5CNT: RCSB PDBe | Publication DOI: 10.7554/eLife.07141 | Published: 25 Mar 2016

Drennan Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/238
PDB ID 5CNT: RCSB PDBe
Publication DOI: 10.7554/eLife.07141

Drennan Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from E. coli class Ia ribonucleotide reductase dATP inhibited complex bound to CDP and dATP, source of 5CNS structure

Native data set collected in two wedges

Data DOI: 10.15785/SBGRID/236 | PDB ID 5CNS: RCSB PDBe | Publication DOI: 10.7554/eLife.07141 | Published: 25 Mar 2016

Drennan Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/236
PDB ID 5CNS: RCSB PDBe
Publication DOI: 10.7554/eLife.07141

Drennan Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from Pseudomonas aeruginosa PAO1 protein PA0091, source of 4MTK structure

Best native dataset

Data DOI: 10.15785/SBGRID/235 | PDB ID 4MTK: RCSB PDBe | Published: 22 Apr 2016

Leiman Laboratory, École Polytechnique Fédérale de Lausanne

Data DOI: 10.15785/SBGRID/235
PDB ID 4MTK: RCSB PDBe

Leiman Laboratory, École Polytechnique Fédérale de Lausanne

X-Ray Diffraction data from Sec7 (T. terrestris) DCB/HUS domain, source of 5HAS structure

Native dataset

Data DOI: 10.15785/SBGRID/234 | PDB ID 5HAS: RCSB PDBe | Publication DOI: 10.7554/eLife.12411 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/234
PDB ID 5HAS: RCSB PDBe
Publication DOI: 10.7554/eLife.12411

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Sec7 (T. terrestris) DCB/HUS domain, source of 5HAS structure

SAD data of SeMet protein crystals. Data was collected in 10-image wedges using an inverse beam strategy.

Data DOI: 10.15785/SBGRID/233 | PDB ID 5HAS: RCSB PDBe | Publication DOI: 10.7554/eLife.12411 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/233
PDB ID 5HAS: RCSB PDBe
Publication DOI: 10.7554/eLife.12411

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Snf7 core (ESCRT-III filament), source of 5FD9 structure

Data collected on Snf7 filament crystals after high-pressure freezing.

Data DOI: 10.15785/SBGRID/232 | PDB ID 5FD9: RCSB PDBe | Publication DOI: 10.7554/eLife.12548 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/232
PDB ID 5FD9: RCSB PDBe
Publication DOI: 10.7554/eLife.12548

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Snf7 core (ESCRT-III filament), source of 5FD7 structure

Data collected on the Snf7 ESCRT-III filament at ambient pressure

Data DOI: 10.15785/SBGRID/231 | PDB ID 5FD7: RCSB PDBe | Publication DOI: 10.7554/eLife.12548 | Published: 11 Mar 2016

Fromme Laboratory, Cornell University

Data DOI: 10.15785/SBGRID/231
PDB ID 5FD7: RCSB PDBe
Publication DOI: 10.7554/eLife.12548

Fromme Laboratory, Cornell University

X-Ray Diffraction data from Bacteroides fragilis fragipain protease, source of 5DYN structure

native dataset collected from single crystal of B. fragilis fragipain protease

Data DOI: 10.15785/SBGRID/225 | PDB ID 5DYN: RCSB PDBe | Publication DOI: 10.1038/nm.4077 | Published: 8 Mar 2016

Crosson Laboratory, University of Chicago

Data DOI: 10.15785/SBGRID/225
PDB ID 5DYN: RCSB PDBe
Publication DOI: 10.1038/nm.4077

Crosson Laboratory, University of Chicago

Micro-Electron Diffraction data from alpha-synuclein, source of 4RIL structure

Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction.

Data DOI: 10.15785/SBGRID/223 | PDB ID 4RIL: RCSB PDBe | Publication DOI: 10.1038/nature15368 | Published: 4 Mar 2016

Gonen Laboratory, University of California, Los Angeles

Data DOI: 10.15785/SBGRID/223
PDB ID 4RIL: RCSB PDBe
Publication DOI: 10.1038/nature15368

Gonen Laboratory, University of California, Los Angeles

Micro-Electron Diffraction data from Lysozyme, source of 3J6K structure

Lysozyme microcrystals

Data DOI: 10.15785/SBGRID/222 | PDB ID 3J6K: RCSB PDBe | Publication DOI: 10.1038/nmeth.3043 | Published: 4 Mar 2016

Gonen Laboratory, University of California, Los Angeles

Data DOI: 10.15785/SBGRID/222
PDB ID 3J6K: RCSB PDBe
Publication DOI: 10.1038/nmeth.3043

Gonen Laboratory, University of California, Los Angeles

Template-based Haddock models

THIS DATA IS ORIGINALLY USED IN XUE ET AL., BRIEFINGS IN BIOINFORMATICS, 2016: TEMPLATE-BASED PROTEIN-PROTEIN DOCKING EXPLOITING PAIRWISE INTERFACIAL RESIDUE RESTRAINTS by Li C Xue, Joao P.G.L.M. Rodrigues, Drena Dobbs, Vasant Honavar, Alexandre M.J.J. Bonvin

Data DOI: 10.15785/SBGRID/221 | Publication DOI: 10.1093/bib/bbw027 | Published: 9 Mar 2016

Bonvin Laboratory, Utrecht University

Data DOI: 10.15785/SBGRID/221
Publication DOI: 10.1093/bib/bbw027

Bonvin Laboratory, Utrecht University

X-Ray Diffraction data from CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7, source of 4YGA structure

SeMet dataset.

Data DOI: 10.15785/SBGRID/220 | PDB ID 4YGA: RCSB PDBe | Publication DOI: 10.1073/pnas.1505914112 | Published: 15 Jan 2016

Schwartz Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/220
PDB ID 4YGA: RCSB PDBe
Publication DOI: 10.1073/pnas.1505914112

Schwartz Laboratory, Massachusetts Institute of Technology

X-Ray Diffraction data from CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7 , source of 4YGA structure

Native data.

Data DOI: 10.15785/SBGRID/219 | PDB ID 4YGA: RCSB PDBe | Publication DOI: 10.1073/pnas.1505914112 | Published: 15 Jan 2016

Schwartz Laboratory, Massachusetts Institute of Technology

Data DOI: 10.15785/SBGRID/219
PDB ID 4YGA: RCSB PDBe
Publication DOI: 10.1073/pnas.1505914112

Schwartz Laboratory, Massachusetts Institute of Technology