X-Ray Diffraction data from SrpA, source of 5EQ2 structure

Data DOI: 10.15785/SBGRID/241 | ID: 241

5EQ2 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Iverson Laboratory, Vanderbilt University

Release Date: April 1, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/241

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/241 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/241 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/241 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/241 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 241 ; shasum -c files.sha'

Storage requirements: 6.4G

Biological Sample:

SrpA

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS beamline 21-IDF

Data Creation Date:

Feb. 19, 2015

Related Datasets:

None


Cite this Dataset

Loukachevitch, L; Iverson, TM. 2016. "X-Ray Diffraction data for: SrpA. PDB Code 5EQ2", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/241.

Download Citation

Dataset Description

SrpA (unliganded) in space group C2

Project Members

Name Additional Roles Affiliation While Working on the Project
Tina M IversonDepositorVanderbilt
Lioudmila LoukachevitchData CollectorVanderbilt
Tina IversonPIVanderbilt University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/241/ll_srpasu_1_3_8_23.###

Images:

1 - 360

Beam:

(112.37, 111.99) -> (112.37, 112.12)

Distance:

180.0 -> 179.87

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.74 4.72 1.74
Low resolution limit 45.03 45.04 1.77
Completeness 99.1 99.1 91.4
Multiplicity 7.4 7.1 6.3
I/sigma 8.4 15.0 2.1
Rmerge 0.179 0.077 2.277
CC half 0.994 0.995 0.274
Anomalous completeness 99.0 98.1 92.8
Anomalous multiplicity 3.8 3.8 3.8
Cell 174.149 46.7 64.702 90.0 102.732 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/241/ll_srpasu_1_3_8_23.###

Images:

1 - 360

Beam:

(112.37, 111.99) -> (112.37, 112.03)

Distance:

180.0 -> 179.78

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.68 4.56 1.68
Low resolution limit 56.99 57.02 1.71
Completeness 96.9 99.1 72.8
Multiplicity 7.2 6.7 6.1
I/sigma 10.3 22.8 1.1
Rmerge 0.119 0.059 1.555
CC half 0.996 0.996 0.319
Anomalous completeness 96.3 98.3 73.7
Anomalous multiplicity 3.7 3.7 3.7
Cell 174.06 46.76 64.67 90.0 102.7 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/241/ll_srpasu_1_3_8_23.###

Images:

1 - 360

Beam:

(112.37, 111.99) -> (112.37, 112.03)

Distance:

180.0 -> 179.82

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.68 4.56 1.68
Low resolution limit 56.99 57.02 1.71
Completeness 96.9 99.1 72.8
Multiplicity 7.2 6.7 6.1
I/sigma 10.3 22.8 1.1
Rmerge 0.119 0.059 1.554
CC half 0.996 0.996 0.307
Anomalous completeness 96.3 98.2 73.7
Anomalous multiplicity 3.7 3.7 3.7
Cell 174.06 46.76 64.67 90.0 102.7 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/241/ll_srpasu_1_3_8_23.###

Images:

1 - 360

Beam:

(112.37, 111.99) -> (112.37, 112.1)

Distance:

180.0 -> 179.21

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.75 4.74 1.75
Low resolution limit 39.47 39.48 1.78
Completeness 99.2 99.4 90.9
Multiplicity 7.4 7.2 6.3
I/sigma 8.2 14.1 2.1
Rmerge 0.179 0.07 3.724
CC half 0.994 0.993 0.271
Anomalous completeness 99.2 98.2 92.2
Anomalous multiplicity 3.8 3.8 3.8
Cell 174.064 46.743 64.684 90.0 102.712 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.