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X-Ray Diffraction data from Human Annexin A13a, source of 6B3I structure

Data DOI: 10.15785/SBGRID/353 | ID: 353

6B3I Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Iverson Laboratory, Vanderbilt University

Release Date: Dec. 21, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/353

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/353 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/353 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/353 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/353 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 353 ; shasum -c files.sha'

Storage requirements: 6.9G

Biological Sample:

Human Annexin A13a

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS LS-CAT 21-ID-G

Data Creation Date:

June 12, 2014

Related Datasets:

None


Cite this Dataset

McCulloch, KM; Foegeding, NJ; Singh, PK; Iverson, TM. 2018. "X-Ray Diffraction data for: Human Annexin A13a. PDB Code 6B3I", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/353.

Download Citation

Dataset Description

Native dataset to 2.6 A resolution of Human Annexin A13a

Project Members

Name Additional Roles Affiliation While Working on the Project
Kathryn M McCullochDepositorVanderbilt University
Nora J FoegedingData CollectorVanderbilt University
Prashant K SinghData CollectorVanderbilt University
Tina M IversonData Collector, PIVanderbilt University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97856

Sweep:

SWEEP1

Files:

/programs/datagrid/353/049-02.###

Images:

1 - 220

Beam:

(145.35, 155.44) -> (145.35, 155.44)

Distance:

330.0 -> 330.11

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.41 6.54 2.41
Low resolution limit 91.67 91.74 2.45
Completeness 98.8 96.5 98.1
Multiplicity 4.7 4.3 4.8
I/sigma 6.4 12.2 1.0
Rmerge 0.113 0.076 1.424
CC half 0.989 0.985 0.409
Anomalous completeness 98.1 93.9 97.4
Anomalous multiplicity 2.4 2.4 2.4
Cell 190.731 93.863 94.889 90.0 106.001 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97856

Sweep:

SWEEP1

Files:

/programs/datagrid/353/049-02.###

Images:

1 - 220

Beam:

(145.35, 155.44) -> (145.35, 155.37)

Distance:

330.0 -> 329.81

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.76 7.49 2.76
Low resolution limit 58.09 58.1 2.81
Completeness 98.1 95.8 97.8
Multiplicity 2.4 2.2 2.4
I/sigma 3.3 5.5 1.0
Rmerge 0.11 0.07 1.479
CC half 0.972 0.968 0.614
Anomalous completeness 94.7 85.8 95.9
Anomalous multiplicity 1.2 1.2 1.2
Cell 94.86 106.2 253.45 94.06 95.97 104.33

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97856

Sweep:

SWEEP1

Files:

/programs/datagrid/353/049-02.###

Images:

1 - 220

Beam:

(145.35, 155.44) -> (145.35, 155.37)

Distance:

330.0 -> 329.41

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.45 6.65 2.45
Low resolution limit 65.55 65.58 2.49
Completeness 98.5 96.6 98.6
Multiplicity 4.6 4.3 4.7
I/sigma 5.3 11.0 0.5
Rmerge 0.085 0.05 2.74
CC half 0.993 0.993 0.345
Anomalous completeness 94.9 92.1 96.2
Anomalous multiplicity 2.4 2.4 2.4
Cell 94.85 93.86 188.0 90.0 102.98 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97856

Sweep:

SWEEP1

Files:

/programs/datagrid/353/049-02.###

Images:

1 - 220

Beam:

(145.35, 155.44) -> (145.35, 155.46)

Distance:

330.0 -> 329.1

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.46 6.67 2.46
Low resolution limit 65.8 65.82 2.5
Completeness 99.1 96.6 97.4
Multiplicity 4.7 4.3 4.7
I/sigma 7.1 13.3 1.2
Rmerge 0.089 0.065 1.481
CC half 0.992 0.985 0.661
Anomalous completeness 98.3 93.6 96.5
Anomalous multiplicity 2.4 2.4 2.4
Cell 190.447 93.781 94.769 90.0 106.026 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.