X-Ray Diffraction data from Catalytic domains of Human Mettl3/Mettl14 complex with SAM, source of 5K7U structure

Data DOI: 10.15785/SBGRID/348 | ID: 348

Publication DOI: 10.1016/j.molcel.2016.05.041

5K7U Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Nam Laboratory, UT Southwestern Medical Center

Release Date: Aug. 5, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/348

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/348 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/348 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/348 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/348 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 348 ; shasum -c files.sha'

Storage requirements: 5.9G

Biological Sample:

Catalytic domains of Human Mettl3/Mettl14 complex with SAM

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

beamline 19ID, APS, Chicago, IL

Data Creation Date:

March 17, 2016

Related Datasets:

None


Cite this Dataset

Wang, P; Nam, Y. 2016. "X-Ray Diffraction data for: Catalytic domains of Human Mettl3/Mettl14 complex with SAM. PDB Code 5K7U", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/348.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Ping WangData Collector, DepositorUT Southwestern Medical Center
Yunsun NamUT Southwestern Medical Center
Yunsun NamPIUT Southwestern Medical Center

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/348/sa42m_#####.cbf

Images:

1 - 999

Beam:

(217.58, 215.0) -> (217.58, 215.1)

Distance:

310.04 -> 307.99

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.58 4.29 1.58
Low resolution limit 39.22 39.24 1.61
Completeness 99.9 100.0 97.8
Multiplicity 21.1 20.1 16.6
I/sigma 24.6 70.9 1.1
Rmerge 0.06 0.033 2.302
CC half 1.0 1.0 0.474
Anomalous completeness 99.8 99.9 97.2
Anomalous multiplicity 11.1 11.1 11.1
Cell 101.88 101.88 117.67 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/348/sa42m_#####.cbf

Images:

1 - 999

Beam:

(217.58, 215.0) -> (217.58, 215.11)

Distance:

310.04 -> 308.84

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.58 4.29 1.58
Low resolution limit 50.95 50.98 1.61
Completeness 99.9 100.0 97.8
Multiplicity 21.1 20.1 16.6
I/sigma 24.6 70.8 1.1
Rmerge 0.06 0.033 2.301
CC half 1.0 1.0 0.486
Anomalous completeness 99.8 99.9 97.2
Anomalous multiplicity 11.1 11.1 11.1
Cell 101.88 101.88 117.67 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/348/sa42m_#####.cbf

Images:

1 - 999

Beam:

(217.58, 215.0) -> (217.58, 215.11)

Distance:

310.04 -> 308.62

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.51 4.1 1.51
Low resolution limit 50.89 50.92 1.54
Completeness 98.7 100.0 85.3
Multiplicity 20.1 20.0 11.7
I/sigma 19.1 60.6 0.9
Rmerge 0.067 0.036 1.985
CC half 1.0 1.0 0.438
Anomalous completeness 98.6 99.7 85.3
Anomalous multiplicity 10.5 10.5 10.5
Cell 101.819 101.819 117.524 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.