X-Ray Diffraction data from human metapneumovirus fusion protein in postfusion conformation, source of 5L1X structure

Data DOI: 10.15785/SBGRID/360 | ID: 360

5L1X Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McLellan Laboratory, University of Texas at Austin

Release Date: Aug. 30, 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/360

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/360 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/360 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/360 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/360 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 360 ; shasum -c files.sha'

Storage requirements: 9.2G

Biological Sample:

human metapneumovirus fusion protein in postfusion conformation

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

19-ID, SBC, APS, Chicago, IL

Data Creation Date:

July 24, 2015

Related Datasets:

None


Cite this Dataset

McLellan, JS. 2016. "X-Ray Diffraction data for: human metapneumovirus fusion protein in postfusion conformation. PDB Code 5L1X", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/360.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Jason S McLellanData Collector, DepositorGeisel School of Medicine at Dartmouth
Jason McLellanPIUniversity of Texas at Austin

Reprocessing Instructions

reverse direction of spindle rotation Beam center, as defined in image headers, needs to be correct to: X=153.123 Y=162.511 Frames 1-120 and 361-520 were used to generate the mtz file used for structure determination

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/360/hMPVPostF_P4P10_T2.####.img

Images:

1 - 520

Beam:

(154.5, 159.98) -> (154.5, 162.53)

Distance:

496.63 -> 498.01

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.19 8.65 3.19
Low resolution limit 69.37 69.39 3.25
Completeness 99.8 99.0 100.0
Multiplicity 10.2 9.1 9.3
I/sigma 7.6 20.3 1.2
Rmerge 0.315 0.065 1.902
CC half 0.994 0.994 0.748
Anomalous completeness 99.8 99.2 99.9
Anomalous multiplicity 5.5 5.5 5.5
Cell 129.0 129.0 575.97 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97934

Sweep:

SWEEP1

Files:

/programs/datagrid/360/hMPVPostF_P4P10_T2.####.img

Images:

1 - 520

Beam:

(154.5, 159.98) -> (154.5, 162.53)

Distance:

496.63 -> 498.56

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.13 8.5 3.13
Low resolution limit 62.54 62.55 3.19
Completeness 99.5 98.4 95.0
Multiplicity 10.0 9.1 7.9
I/sigma 6.7 13.9 1.3
Rmerge 0.394 0.093 29.141
CC half 0.99 0.991 0.678
Anomalous completeness 99.4 99.9 92.5
Anomalous multiplicity 5.4 5.4 5.4
Cell 129.317 129.317 246.055 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.