Maintance Thur 2026 Nov 12

The SBDB will be undergoing infrastructure maintance Thur 2026 Nov 12 between 10AM and 6PM ET. Dataset registrations, dataset depositions, and dataset downloads from the primary location will be unavailable; API access will also be impacted.

Lab/Institutional Collections
Datasets

X-Ray Diffraction data from AS4.3-RNASEH2b-HLA*B27, source of 7N2P structure

native dataset

X-Ray Diffraction data from AS3.1-PRPF3-HLA*B27, source of 7N2S structure

native dataset

X-Ray Diffraction data from AS4.2-PRPF3-HLA*B27, source of 7N2N structure

native dataset

X-Ray Diffraction data from AS4.2-YEIH-HLA*B27, source of 7N2O structure

native dataset

X-Ray Diffraction data from TCR-antigen complex AS8.4-YEIH-HLA*B27, source of 8CX4 structure

native dataset

Models of protein-peptide complexes

Protein-cyclic peptides docking models obtained with HADDOCK corresponding to the optimal protocol described in: V. Charitou, S.C. van Keulen and A.M.J.J. Bonvin. A Cyclisation and Docking Protocol for Cyclic Peptide-Protein Modelling using HADDOCK2.4. J. Chem. Theo. and Comp. (2022) - https://doi.org/10.1021/acs.jctc.2c00075

X-Ray Diffraction data from Apoptosis-inducing protein of 56kDa (AIP56), source of 7ZPF structure

X-Ray Diffraction data from Photobacterium damselae subsp. piscicida AIP56, source of 7ZPF structure

X-Ray Diffraction data from Ternary complex of Yersinia enterocolitica type III secretion (T3S) proteins YscV, YscX and YscY, source of 7QIJ structure

native data

X-Ray Diffraction data from Complex of Yersinia enterocolitica type III secretion (T3S) proteins YscX and YscY (YscX32:YscY), source of 7QII structure

native data

X-Ray Diffraction data from Complex of Yersinia enterocolitica type III secretion (T3S) proteins YscX and YscY (YscX50:YscY), source of 7QIH structure

native data

X-Ray Diffraction data from STRUCTURE of the Bacteriophytochrome Response Regulator AtBrr at 1.9 Angstrom resolution, source of 5BRJ structure

Bacterial Response regulator from Agrobacterium Tumefaciens.

X-Ray Diffraction data from Bacteriophytochrome Response Regulator RtBrr, source of 5IC5 structure

720 frames were collected at 1 degree/frame but only 360 were used. Contains both Zn and Cacodylate molecules (As) and has an anomalous signal.

X-Ray Diffraction data from horse liver alcohol dehydrogenase G173A with NAD and pentafluorobenzyl alcohol at 1.2 A , 150 K, source of 7UHX structure

two passes, phi = 0 and 180 N2 cryostat at 150 K

X-Ray Diffraction data from horse liver alcohol dehydrogenase G173A with NAD and pentafluorobenzyl alcohol at 1.2 A , 120 K, source of 7UHW structure

two passes, phi = 0 and 180

X-Ray Diffraction data from horse liver alcohol dehydrogenase G173A with NAD and pentafluorobenzyl alcohol at 1.2 A , 85 K, source of 5KJ1 structure

two passes, phi = 0 and 180

X-Ray Diffraction data from horse liver alcohol dehydrogenase G173A with NAD and pentafluorobenzyl alcohol at 1.2 A , 50 K, source of 7UHV structure

two passes, phi = 0 and 180 60 K with He cryostat

X-Ray Diffraction data from horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol #16 at 1.2 A and 150 K, source of 7UEJ structure

two passes, at phi = 0 and 180

X-Ray Diffraction data from horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol #16 at 1.1 A at 100 K, source of 7UEI structure

two passes, at phi = 0 and 180 Crystal 16, 100 K

X-Ray Diffraction data from horse liver alcohol dehydrogenase complexed with NAD and pentafluorobenzyl alcohol at 1.1 A and 85 K, source of 7UEF structure

one pass at phi = 0

X-Ray Diffraction data from horse liver alcohol dehydrogenase complexed with NAD and pentafluorobenzyl alcohol at 1.1 A and 75 K, source of 7UEE structure

two passes, phi = 0 and 180