Data DOI: 10.15785/SBGRID/906 | ID: 906
Publication DOI: 10.1038/s41467-022-30487-1
7QII Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Niemann Laboratory, Bielefeld University
Release Date: 23 Sep 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/906
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/906 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/906 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/906 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/906 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 906 ; shasum -c files.sha'
Storage requirements: 4.2G
Biological Sample:
Complex of Yersinia enterocolitica type III secretion (T3S) proteins YscX and YscY (YscX32:YscY)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline PXI - X06SA, Swiss Light Source, Paul Scherrer Institut, Villigen
Data Creation Date:
13 Apr 2014
Related Datasets:
None
Schreiner, M; Niemann, HH. 2022. "X-Ray Diffraction data for: Complex of Yersinia enterocolitica type III secretion (T3S) proteins YscX and YscY (YscX32:YscY). PDB Code 7QII", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/906.
native data
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Madeleine Schreiner | Data Collector | Bielefeld University |
| Hartmut H Niemann | Depositor, PI | Bielefeld University |
Relevant information can be retrieved from the image header. The XDS.INP file used for processing is given under Processing Bundle.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/906/ms84_1_data_1_#####.cbf
Images:
1 - 720
Beam:
(214.42, 212.68) -> (214.42, 212.81)
Distance:
300.02 -> 303.67
Spacegroup:
I 41 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.11 | 8.43 | 3.11 |
| Low resolution limit | 56.97 | 56.98 | 3.16 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.0 | 11.5 | 14.0 |
| I/sigma | 11.1 | 39.3 | 0.6 |
| Rmerge | 0.139 | 0.044 | 4.127 |
| CC half | 0.999 | 0.998 | 0.302 |
| Anomalous completeness | 100.0 | 100.0 | 100.0 |
| Anomalous multiplicity | 7.1 | 7.1 | 7.1 |
| Cell | 180.15 | 180.15 | 41.28 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/906/ms84_1_data_1_#####.cbf
Images:
1 - 720
Beam:
(214.42, 212.68) -> (214.42, 212.8)
Distance:
300.02 -> 301.29
Spacegroup:
I 41 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.06 | 8.3 | 3.06 |
| Low resolution limit | 56.99 | 57.0 | 3.11 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.0 | 11.5 | 13.9 |
| I/sigma | 10.6 | 39.1 | 0.5 |
| Rmerge | 0.146 | 0.044 | 5.016 |
| CC half | 0.999 | 0.998 | 0.347 |
| Anomalous completeness | 100.0 | 100.0 | 100.0 |
| Anomalous multiplicity | 7.1 | 7.1 | 7.1 |
| Cell | 180.21 | 180.21 | 41.29 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/906/ms84_1_data_1_#####.cbf
Images:
1 - 720
Beam:
(214.42, 212.68) -> (214.42, 212.8)
Distance:
300.02 -> 302.31
Spacegroup:
I 41 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.95 | 8.0 | 2.95 |
| Low resolution limit | 90.17 | 90.21 | 3.0 |
| Completeness | 100.0 | 100.0 | 99.2 |
| Multiplicity | 13.0 | 11.7 | 12.7 |
| I/sigma | 5.9 | 33.5 | 0.2 |
| Rmerge | 0.155 | 0.062 | 3.731 |
| CC half | 0.998 | 0.994 | 0.232 |
| Anomalous completeness | 100.0 | 100.0 | 99.0 |
| Anomalous multiplicity | 7.1 | 7.1 | 7.1 |
| Cell | 180.341 | 180.341 | 41.316 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
