X-Ray Diffraction data from STRUCTURE of the Bacteriophytochrome Response Regulator AtBrr at 1.9 Angstrom resolution, source of 5BRJ structure

Data DOI: 10.15785/SBGRID/904 | ID: 904

Publication DOI: 10.1128/JB.00872-15

5BRJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Forest Laboratory, University of Wisconsin-Madison

Release Date: April 22, 2022

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/904

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/904 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/904 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/904 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/904 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 904 ; shasum -c files.sha'

Storage requirements: 3.3G

Biological Sample:

STRUCTURE of the Bacteriophytochrome Response Regulator AtBrr at 1.9 Angstrom resolution

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

Advanced Photon Source, LS-Cat, 21-ID_F

Data Creation Date:

Aug. 18, 2014

Related Datasets:

None


Cite this Dataset

Satyshur, KA; Baker, AW; Forest, KT. 2022. "X-Ray Diffraction data for: STRUCTURE of the Bacteriophytochrome Response Regulator AtBrr at 1.9 Angstrom resolution. PDB Code 5BRJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/904.

Download Citation

Dataset Description

Bacterial Response regulator from Agrobacterium Tumefaciens.

Project Members

Name Additional Roles Affiliation While Working on the Project
Kenneth A SatyshurData Collector, DepositorSenior Scientist
Anna W BakerData CollectorGraduate Student
Katrina T ForestPIUniversity of Wisconsin-Madison

Reprocessing Instructions

Processed with HKL2000. Molecular replacement solution from 5IC5. (0.97872) Frames from 1-183 were processed.

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/904/AtBrr05_collect.###

Images:

1 - 183

Beam:

(112.38, 111.95) -> (112.38, 111.93)

Distance:

200.0 -> 200.33

Spacegroup:

P 41 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.61 4.37 1.61
Low resolution limit 30.97 30.97 1.64
Completeness 92.5 100.0 61.4
Multiplicity 11.4 11.6 4.5
I/sigma 19.1 42.9 0.6
Rmerge 0.057 0.039 1.652
CC half 0.999 0.998 0.261
Anomalous completeness 91.3 100.0 55.5
Anomalous multiplicity 6.3 6.3 6.3
Cell 41.08 41.08 188.5 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/904/AtBrr05_collect.###

Images:

1 - 183

Beam:

(112.38, 111.95) -> (112.38, 111.91)

Distance:

200.0 -> 200.25

Spacegroup:

P 41 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.61 4.37 1.61
Low resolution limit 37.7 37.71 1.64
Completeness 92.5 100.0 61.4
Multiplicity 11.4 11.6 4.5
I/sigma 19.2 42.9 0.6
Rmerge 0.057 0.039 1.638
CC half 0.999 0.998 0.259
Anomalous completeness 91.4 100.0 55.5
Anomalous multiplicity 6.3 6.3 6.3
Cell 41.08 41.08 188.5 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97872

Sweep:

SWEEP1

Files:

/programs/datagrid/904/AtBrr05_collect.###

Images:

1 - 183

Beam:

(112.38, 111.95) -> (112.38, 111.98)

Distance:

200.0 -> 200.94

Spacegroup:

P 41 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.55 4.21 1.55
Low resolution limit 41.25 41.26 1.58
Completeness 84.8 99.4 29.1
Multiplicity 11.0 12.3 1.5
I/sigma 13.6 82.1 0.0
Rmerge 0.079 0.042 1.48
CC half 0.999 0.999 0.418
Anomalous completeness 79.8 99.4 7.4
Anomalous multiplicity 6.2 6.2 6.2
Cell 41.216 41.216 189.198 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.