Data DOI: 10.15785/SBGRID/913 | ID: 913
Publication DOI: 10.1038/s41586-022-05501-7
8CX4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 9 Dec 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/913
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/913 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/913 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/913 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/913 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 913 ; shasum -c files.sha'
Storage requirements: 31G
Biological Sample:
TCR-antigen complex AS8.4-YEIH-HLA*B27
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-2, SSRL
Data Creation Date:
22 Apr 2022
Related Datasets:
None
Jude, KM; Garcia, KC; Yang, X; Garcia, K. 2022. "X-Ray Diffraction data for: TCR-antigen complex AS8.4-YEIH-HLA*B27. PDB Code 8CX4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/913.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | HHMI/Stanford University |
| K C Garcia | HHMI/Stanford University | |
| Xinbo Yang | Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
data were processed with XDS
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/913/B11_6_#####.cbf
Images:
1 - 1800
Beam:
(163.61, 155.59) -> (163.61, 155.73)
Distance:
250.0 -> 250.19
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.26 | 6.13 | 2.26 |
| Low resolution limit | 39.77 | 39.78 | 2.3 |
| Completeness | 93.2 | 97.9 | 95.2 |
| Multiplicity | 7.3 | 6.9 | 7.4 |
| I/sigma | 7.2 | 22.2 | 0.7 |
| Rmerge | 0.169 | 0.058 | 2.547 |
| CC half | 0.996 | 0.996 | 0.298 |
| Anomalous completeness | 92.7 | 98.5 | 94.9 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 83.16 | 51.73 | 98.32 | 90.0 | 96.9 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/913/B11_6_#####.cbf
Images:
1 - 1800
Beam:
(163.61, 155.59) -> (163.61, 155.72)
Distance:
250.0 -> 249.09
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.27 | 6.16 | 2.27 |
| Low resolution limit | 40.99 | 40.99 | 2.31 |
| Completeness | 93.2 | 98.0 | 94.8 |
| Multiplicity | 7.3 | 6.9 | 7.4 |
| I/sigma | 7.2 | 22.0 | 0.7 |
| Rmerge | 0.167 | 0.058 | 2.769 |
| CC half | 0.996 | 0.997 | 0.292 |
| Anomalous completeness | 92.7 | 98.6 | 94.4 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 83.18 | 51.74 | 98.34 | 90.0 | 96.9 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
