Maintance Thur 2026 Nov 12

The SBDB will be undergoing infrastructure maintance Thur 2026 Nov 12 between 10AM and 6PM ET. Dataset registrations, dataset depositions, and dataset downloads from the primary location will be unavailable; API access will also be impacted.

X-Ray Diffraction data from E. coli class Ia ribonucleotide reductase dATP inhibited complex bound to CDP and dATP, source of 5CNS structure

Native data set collected in two wedges


X-Ray Diffraction data from Pseudomonas aeruginosa PAO1 protein PA0091, source of 4MTK structure

Best native dataset


X-Ray Diffraction data from Sec7 (T. terrestris) DCB/HUS domain, source of 5HAS structure

Native dataset


X-Ray Diffraction data from Sec7 (T. terrestris) DCB/HUS domain, source of 5HAS structure

SAD data of SeMet protein crystals. Data was collected in 10-image wedges using an inverse beam strategy.


X-Ray Diffraction data from Snf7 core (ESCRT-III filament), source of 5FD9 structure

Data collected on Snf7 filament crystals after high-pressure freezing.


X-Ray Diffraction data from Snf7 core (ESCRT-III filament), source of 5FD7 structure

Data collected on the Snf7 ESCRT-III filament at ambient pressure


X-Ray Diffraction data from Bacteroides fragilis fragipain protease, source of 5DYN structure

native dataset collected from single crystal of B. fragilis fragipain protease


Micro-Electron Diffraction data from alpha-synuclein, source of 4RIL structure

Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction.


Micro-Electron Diffraction data from Lysozyme, source of 3J6K structure

Lysozyme microcrystals


Template-based Haddock models

THIS DATA IS ORIGINALLY USED IN XUE ET AL., BRIEFINGS IN BIOINFORMATICS, 2016: TEMPLATE-BASED PROTEIN-PROTEIN DOCKING EXPLOITING PAIRWISE INTERFACIAL RESIDUE RESTRAINTS by Li C Xue, Joao P.G.L.M. Rodrigues, Drena Dobbs, Vasant Honavar, Alexandre M.J.J. Bonvin


X-Ray Diffraction data from CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7, source of 4YGA structure

SeMet dataset.


X-Ray Diffraction data from CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7 , source of 4YGA structure

Native data.


X-Ray Diffraction data from selenomethionyl neurexin 1alpha ectodomain, source of 3QCW structure

selenomethionyl neurexin 1alpha ectodomain


X-Ray Diffraction data from Prefusion RSV F Glycoprotein Fusion Inhibitor Resistance Mutant D489Y, source of 5EA8 structure

Native dataset


X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor BMS-433771, source of 5EA7 structure

Native dataset


X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor BTA-9881, source of 5EA6 structure

Native dataset


X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor TMC-353121, source of 5EA5 structure

Native dataset


X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-49153390, source of 5EA4 structure

Native dataset


X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-2408068, source of 5EA3 structure

Native dataset


X-Ray Diffraction data from KRIT1 ARD-FERM, source of 5D68 structure

180°, 1° oscillations.