X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-2408068, source of 5EA3 structure

Data DOI: 10.15785/SBGRID/212 | ID: 212

Publication DOI: 10.1038/nchembio.1982

5EA3 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McLellan Laboratory, University of Texas at Austin

Release Date: 8 Jan 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/212

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/212 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/212 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/212 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/212 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 212 ; shasum -c files.sha'

Storage requirements: 3.0G

Biological Sample:

Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-2408068

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

ALS BEAMLINE 5.0.2

Data Creation Date:

17 Dec 2014

Related Datasets:

None


Cite this Dataset

Battles, MB; McLellan, JS. 2016. "X-Ray Diffraction data for: Prefusion RSV F Glycoprotein In Complex with Inhibitor JNJ-2408068. PDB Code 5EA3", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/212.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Michael B BattlesData Collector, DepositorGeisel School of Medicine at Dartmouth
Jason S McLellanGeisel School of Medicine at Dartmouth
Jason McLellanPIUniversity of Texas at Austin

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/212/Pin2_1_###.img

Images:

1 - 167

Beam:

(157.5, 161.9) -> (157.5, 161.74)

Distance:

450.0 -> 451.83

Spacegroup:

P 43 3 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.72 7.38 2.72
Low resolution limit 85.09 85.13 2.77
Completeness 100.0 100.0 100.0
Multiplicity 33.3 32.6 17.6
I/sigma 17.1 43.1 1.3
Rmerge 0.272 0.068 5.035
CC half 0.998 0.999 0.435
Anomalous completeness 100.0 100.0 100.0
Anomalous multiplicity 18.1 18.1 18.1
Cell 170.174 170.174 170.174 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/212/Pin2_1_###.img

Images:

1 - 167

Beam:

(157.5, 161.9) -> (157.5, 161.7)

Distance:

450.0 -> 451.87

Spacegroup:

P 43 3 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.79 7.57 2.79
Low resolution limit 85.15 85.19 2.84
Completeness 100.0 100.0 100.0
Multiplicity 36.3 30.7 23.1
I/sigma 25.0 69.6 1.4
Rmerge 0.166 0.04 2.749
CC half 0.999 1.0 0.609
Anomalous completeness 99.9 100.0 100.0
Anomalous multiplicity 19.8 19.8 19.8
Cell 170.31 170.31 170.31 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/212/Pin2_1_###.img

Images:

1 - 167

Beam:

(157.5, 161.9) -> (157.5, 161.7)

Distance:

450.0 -> 451.52

Spacegroup:

P 43 3 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.8 7.6 2.8
Low resolution limit 85.15 85.19 2.85
Completeness 100.0 100.0 100.0
Multiplicity 36.5 30.7 23.8
I/sigma 25.2 69.6 1.5
Rmerge 0.165 0.04 2.672
CC half 0.999 1.0 0.658
Anomalous completeness 99.9 100.0 99.9
Anomalous multiplicity 19.9 19.9 19.9
Cell 170.31 170.31 170.31 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/212/Pin2_1_###.img

Images:

1 - 167

Beam:

(157.5, 161.9) -> (157.5, 161.71)

Distance:

450.0 -> 447.64

Spacegroup:

P 43 3 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.94 7.97 2.94
Low resolution limit 85.08 85.12 2.99
Completeness 100.0 100.0 100.0
Multiplicity 38.0 33.1 30.2
I/sigma 17.4 38.8 2.5
Rmerge 0.239 0.055 3.124
CC half 0.998 0.998 0.892
Anomalous completeness 100.0 100.0 100.0
Anomalous multiplicity 20.8 20.8 20.8
Cell 170.169 170.169 170.169 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.