Data DOI: 10.15785/SBGRID/231 | ID: 231
Publication DOI: 10.7554/eLife.12548
5FD7 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Fromme Laboratory, Cornell University
Release Date: 11 Mar 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/231
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/231 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/231 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/231 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/231 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 231 ; shasum -c files.sha'
Storage requirements: 1.5G
Biological Sample:
Snf7 core (ESCRT-III filament)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
CHESS F1
Data Creation Date:
26 Mar 2015
Related Datasets:
None
Emr, SD.; Mao, Y; Tang, S; Fromme, J. 2016. "X-Ray Diffraction data for: Snf7 core (ESCRT-III filament). PDB Code 5FD7", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/231.
Data collected on the Snf7 ESCRT-III filament at ambient pressure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Scott D. Emr | Cornell University | |
| Yuxin Mao | Cornell University | |
| Shaogang Tang | Data Collector | Cornell University |
| J. Christopher Fromme | Data Collector, Depositor, PI | Cornell University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9804
Sweep:
SWEEP1
Files:
/programs/datagrid/231/two_1_###.img
Images:
1 - 180
Beam:
(138.66, 129.76) -> (138.66, 130.18)
Distance:
300.0 -> 300.02
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.94 | 5.25 | 1.94 |
| Low resolution limit | 27.2 | 27.2 | 1.97 |
| Completeness | 85.8 | 89.7 | 44.6 |
| Multiplicity | 3.2 | 3.4 | 1.8 |
| I/sigma | 7.6 | 22.0 | 0.5 |
| Rmerge | 0.058 | 0.04 | 1.183 |
| CC half | 0.995 | 0.993 | 0.345 |
| Anomalous completeness | 73.5 | 81.4 | 23.4 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 29.76 | 52.35 | 54.95 | 90.0 | 98.16 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9804
Sweep:
SWEEP1
Files:
/programs/datagrid/231/two_1_###.img
Images:
1 - 180
Beam:
(138.66, 129.76) -> (138.66, 130.22)
Distance:
300.0 -> 299.27
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.09 | 5.66 | 2.09 |
| Low resolution limit | 29.8 | 29.8 | 2.13 |
| Completeness | 93.8 | 92.1 | 68.4 |
| Multiplicity | 3.4 | 3.4 | 2.3 |
| I/sigma | 4.3 | 10.7 | 0.4 |
| Rmerge | 0.08 | 0.044 | 1.978 |
| CC half | 0.996 | 0.995 | 0.314 |
| Anomalous completeness | 84.0 | 84.1 | 43.9 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 29.76 | 52.34 | 109.67 | 90.0 | 97.42 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
