X-Ray Diffraction data from Prefusion RSV F Glycoprotein In Complex with Inhibitor TMC-353121, source of 5EA5 structure

Data DOI: 10.15785/SBGRID/214 | ID: 214

Publication DOI: 10.1038/nchembio.1982

5EA5 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

McLellan Laboratory, University of Texas at Austin

Release Date: 8 Jan 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/214

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/214 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/214 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/214 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/214 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 214 ; shasum -c files.sha'

Storage requirements: 2.2G

Biological Sample:

Prefusion RSV F Glycoprotein In Complex with Inhibitor TMC-353121

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

ALS BEAMLINE 5.0.1

Data Creation Date:

18 Dec 2014

Related Datasets:

None


Cite this Dataset

Battles, MB; McLellan, JS. 2016. "X-Ray Diffraction data for: Prefusion RSV F Glycoprotein In Complex with Inhibitor TMC-353121. PDB Code 5EA5", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/214.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Michael B BattlesData Collector, DepositorGeisel School of Medicine at Dartmouth
Jason S McLellanGeisel School of Medicine at Dartmouth
Jason McLellanPIUniversity of Texas at Austin

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/214/pin6_2_###.img

Images:

1 - 120

Beam:

(156.3, 157.2) -> (156.3, 156.86)

Distance:

450.0 -> 450.75

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.83 10.39 3.83
Low resolution limit 120.21 120.27 3.9
Completeness 69.5 67.8 72.1
Multiplicity 1.7 1.9 1.7
I/sigma 6.8 20.8 2.8
Rmerge 0.0 0.0 0.0
CC half 0.856 0.993 0.702
Anomalous completeness 51.1 61.5 49.3
Anomalous multiplicity 1.0 1.0 1.0
Cell 169.84 169.962 170.029 90.02 90.026 90.066

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/214/pin6_2_###.img

Images:

1 - 120

Beam:

(156.3, 157.2) -> (156.3, 156.8)

Distance:

450.0 -> 451.73

Spacegroup:

P 43 3 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.14 8.52 3.14
Low resolution limit 56.71 56.72 3.19
Completeness 100.0 100.0 100.0
Multiplicity 27.7 24.3 28.2
I/sigma 19.4 82.0 1.4
Rmerge 0.234 0.028 3.247
CC half 0.999 1.0 0.612
Anomalous completeness 99.9 100.0 99.8
Anomalous multiplicity 15.2 15.2 15.2
Cell 170.12 170.12 170.12 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/214/pin6_2_###.img

Images:

1 - 120

Beam:

(156.3, 157.2) -> (156.3, 156.8)

Distance:

450.0 -> 451.97

Spacegroup:

P 43 3 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.1 8.41 3.1
Low resolution limit 76.08 76.1 3.15
Completeness 100.0 100.0 99.9
Multiplicity 27.6 24.2 26.7
I/sigma 18.7 80.8 1.3
Rmerge 0.248 0.028 3.462
CC half 0.999 1.0 0.459
Anomalous completeness 99.9 100.0 99.0
Anomalous multiplicity 15.2 15.2 15.2
Cell 170.11 170.11 170.11 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/214/pin6_2_###.img

Images:

1 - 120

Beam:

(156.3, 157.2) -> (156.3, 156.81)

Distance:

450.0 -> 450.54

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 3.81 10.33 3.81
Low resolution limit 76.3 76.31 3.87
Completeness 72.4 69.3 64.5
Multiplicity 1.7 1.9 1.7
I/sigma 3.7 14.5 0.6
Rmerge 0.112 0.0 0.135
CC half 0.864 0.994 0.611
Anomalous completeness 52.1 61.8 42.5
Anomalous multiplicity 1.0 1.0 1.0
Cell 170.458 170.403 170.619 90.026 89.989 90.077

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.