Data DOI: 10.15785/SBGRID/137 | ID: 137
Publication DOI: 10.1074/jbc.M314199200
1V9Z Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Raman Laboratory, University of Maryland
Release Date: 5 Jun 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/137
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/137 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/137 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/137 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/137 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 137 ; shasum -c files.sha'
Storage requirements: 126M
Biological Sample:
Escherichia coli DOS Br complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
BL 9-2, Stanford Synchrotron Radiation Laboratory
Data Creation Date:
5 Jan 2003
Related Datasets:
Lee, D; Raman, Cs. 2015. "X-Ray Diffraction data for: Escherichia coli DOS Br complex. PDB Code 1V9Z", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/137.
DOS crystals quick-soaked (10 s) with 0.5 KBr were used for data collection at 1.08 A . f" (0.6) is not optimal at this wavelength. Nonetheless, the data yield useful information regarding binding sites.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| C s Raman | Data Collector, Depositor | University of Texas Medical School |
| Dong-Sun Lee | Data Collector | University of Texas Medical School |
| C S Raman | PI | University of Maryland |
XDS/HKL2000/MOSFLM all work well.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.08
Sweep:
SWEEP1
Files:
/programs/datagrid/137/dosBr_###.mar1200
Images:
1 - 103
Beam:
(90.0, 90.0) -> (90.0, 91.07)
Distance:
140.0 -> 139.23
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.91 | 5.18 | 1.91 |
| Low resolution limit | 28.28 | 28.28 | 1.94 |
| Completeness | 98.6 | 98.3 | 75.2 |
| Multiplicity | 4.0 | 3.6 | 2.5 |
| I/sigma | 21.6 | 49.9 | 2.8 |
| Rmerge | 0.031 | 0.014 | 0.243 |
| CC half | 0.999 | 0.999 | 0.883 |
| Anomalous completeness | 94.8 | 91.6 | 49.3 |
| Anomalous multiplicity | 2.2 | 2.2 | 2.2 |
| Cell | 47.08 | 68.69 | 82.52 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.08
Sweep:
SWEEP1
Files:
/programs/datagrid/137/dosBr_###.mar1200
Images:
1 - 103
Beam:
(90.0, 90.0) -> (90.0, 91.08)
Distance:
140.0 -> 139.31
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.91 | 5.18 | 1.91 |
| Low resolution limit | 28.28 | 28.28 | 1.94 |
| Completeness | 98.6 | 98.3 | 75.3 |
| Multiplicity | 4.0 | 3.6 | 2.5 |
| I/sigma | 21.6 | 49.8 | 2.8 |
| Rmerge | 0.031 | 0.014 | 0.242 |
| CC half | 0.999 | 0.999 | 0.88 |
| Anomalous completeness | 94.8 | 91.6 | 49.3 |
| Anomalous multiplicity | 2.2 | 2.2 | 2.2 |
| Cell | 47.08 | 68.69 | 82.52 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.08
Sweep:
SWEEP1
Files:
/programs/datagrid/137/dosBr_###.mar1200
Images:
1 - 103
Beam:
(90.0, 90.0) -> (90.0, 91.07)
Distance:
140.0 -> 139.46
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.8 | 4.89 | 1.8 |
| Low resolution limit | 26.45 | 26.45 | 1.84 |
| Completeness | 95.8 | 98.6 | 88.7 |
| Multiplicity | 3.7 | 3.8 | 2.6 |
| I/sigma | 17.0 | 33.2 | -0.1 |
| Rmerge | 0.114 | 0.043 | -1.106 |
| CC half | 0.839 | 0.975 | 0.248 |
| Anomalous completeness | 89.5 | 98.1 | 69.6 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 47.184 | 68.83 | 82.685 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
