X-Ray Diffraction data from DOS, source of 1V9Z structure

Data DOI: 10.15785/SBGRID/133 | ID: 133

Publication DOI: 10.1074/jbc.M314199200

1V9Z Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Raman Laboratory, University of Maryland

Release Date: May 29, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/133

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/133 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/133 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/133 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/133 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 133 ; shasum -c files.sha'

Storage requirements: 1.5G

Biological Sample:

DOS

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

BL 9-2, Stanford Synchrotron Radiation Laboratory

Data Creation Date:

July 8, 2002

Related Datasets:

134, 135, 136, 137


Cite this Dataset

Lee, DSun; Raman, CS. 2015. "X-Ray Diffraction data for: DOS. PDB Code 1V9Z", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/133.

Download Citation

Dataset Description

Fe-SAD data collected at 7134.81 eV from Escherichia coli DOS crystals, which diffract X-rays to a Bragg spacing of 2.34 A.

Project Members

Name Additional Roles Affiliation While Working on the Project
C S RamanData Collector, DepositorUniversity of Texas Medical School
Dong Sun LeeData CollectorUniversity of Texas Medical School
C S RamanPIUniversity of Maryland

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.73774

Sweep:

SWEEP2

Files:

/programs/datagrid/133/dos_mad_2_###.img

Images:

181 - 237

Beam:

(94.0, 94.0) -> (94.0, 94.07)

Distance:

70.0 -> 70.29

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.18 5.91 2.18
Low resolution limit 45.87 45.88 2.22
Completeness 99.9 98.6 99.4
Multiplicity 5.4 5.2 3.5
I/sigma 8.4 22.0 1.2
Rmerge 0.139 0.046 0.904
CC half 0.992 0.996 0.504
Anomalous completeness 98.3 94.6 98.4
Anomalous multiplicity 2.9 2.9 2.9
Cell 45.87 68.77 82.48 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.73774

Sweep:

SWEEP2

Files:

/programs/datagrid/133/dos_mad_2_###.img

Images:

181 - 237

Beam:

(94.0, 94.0) -> (94.0, 94.07)

Distance:

70.0 -> 70.17

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.17 5.89 2.17
Low resolution limit 45.87 45.88 2.21
Completeness 99.9 98.9 99.6
Multiplicity 5.3 5.2 3.4
I/sigma 8.3 21.7 1.2
Rmerge 0.139 0.047 0.9
CC half 0.992 0.997 0.508
Anomalous completeness 98.4 94.4 98.1
Anomalous multiplicity 2.9 2.9 2.9
Cell 45.87 68.77 82.48 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.73774

Sweep:

SWEEP2

Files:

/programs/datagrid/133/dos_mad_2_###.img

Images:

181 - 237

Beam:

(94.0, 94.0) -> (94.0, 94.07)

Distance:

70.0 -> 70.08

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.28 6.18 2.28
Low resolution limit 45.89 45.9 2.32
Completeness 100.0 99.0 97.6
Multiplicity 5.5 5.2 3.4
I/sigma 7.0 14.5 1.0
Rmerge 0.137 0.059 0.768
CC half 0.988 0.993 0.635
Anomalous completeness 99.1 96.3 96.9
Anomalous multiplicity 3.0 3.0 3.0
Cell 45.895 68.736 82.376 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.