Data DOI: 10.15785/SBGRID/827 | ID: 827
Publication DOI: 10.1016/j.cell.2021.01.018
6WDP Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: April 27, 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/827
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/827 .'
(Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/827 .'
(Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/827 .'
(Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/827 .'
(Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 827 ; shasum -c files.sha'
Storage requirements: 2.7G
Biological Sample:
Interleukin-12 recepter subunit beta-1
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ALS 8.2.2
Data Creation Date:
Sept. 9, 2011
Related Datasets:
Jude, KM; Garcia, KC; Spangler, JB; Thomas, C; Garcia, K. 2021. "X-Ray Diffraction data for: Interleukin-12 recepter subunit beta-1. PDB Code 6WDP", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/827.
Native dataset
Name | Additional Roles | Affiliation While Working on the Project |
---|---|---|
Kevin M Jude | Depositor | HHMI/Stanford University |
K C Garcia | HHMI/Stanford University | |
Jamie B Spangler | Stanford University | |
Christoph Thomas | Data Collector | Stanford University |
K. Christopher Garcia | PI | Stanford University |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0
Sweep:
SWEEP1
Files:
/programs/datagrid/827/Xtal5_9_###.img
Images:
1 - 152
Beam:
(154.74, 167.66) -> (154.74, 167.64)
Distance:
300.0 -> 298.06
Spacegroup:
P 4 2 2
For AUTOMATIC/DEFAULT/SAD:
ALL | LOW | HIGH | |
---|---|---|---|
High resolution limit | 1.51 | 4.1 | 1.51 |
Low resolution limit | 41.58 | 41.59 | 1.54 |
Completeness | 67.8 | 99.0 | 1.5 |
Multiplicity | 8.2 | 8.1 | 1.1 |
I/sigma | 1.1 | 2.7 | 0.0 |
Rmerge | 0.675 | 0.587 | 0.0 |
CC half | 0.673 | 0.521 | -0.88 |
Anomalous completeness | 62.3 | 96.7 | 0.1 |
Anomalous multiplicity | 4.6 | 4.6 | 4.6 |
Cell | 55.72 | 55.72 | 187.36 | 90.0 | 90.0 | 90.0 |
---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.