Data DOI: 10.15785/SBGRID/487 | ID: 487
Publication DOI: 10.1074/jbc.RA118.001803
5OOH Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 9 Mar 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/487
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/487 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/487 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/487 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/487 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 487 ; shasum -c files.sha'
Storage requirements: 7.1G
Biological Sample:
Human biliverdin IX beta reductase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID23EH1
Data Creation Date:
14 Apr 2010
Related Datasets:
Manso, JA.; Pereira, PJ.B.. 2018. "X-Ray Diffraction data for: Human biliverdin IX beta reductase. PDB Code 5OOH", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/487.
X-Ray Diffraction data from human biliverdin IX beta reductase - erythrosine extra bluish complex, source of 5OOH structure - high resolution pass
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Jose A. Manso | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/487/ac7460_high_1_###.img
Images:
1 - 400
Beam:
(159.16, 158.87) -> (159.16, 158.81)
Distance:
139.43 -> 138.89
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.11 | 3.01 | 1.11 |
| Low resolution limit | 28.93 | 28.94 | 1.13 |
| Completeness | 90.4 | 93.7 | 50.2 |
| Multiplicity | 7.9 | 6.3 | 6.8 |
| I/sigma | 14.9 | 39.5 | 1.2 |
| Rmerge | 0.088 | 0.029 | 1.732 |
| CC half | 0.999 | 0.999 | 0.337 |
| Anomalous completeness | 90.0 | 92.9 | 49.9 |
| Anomalous multiplicity | 4.1 | 4.1 | 4.1 |
| Cell | 49.26 | 107.21 | 40.28 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/487/ac7460_high_1_###.img
Images:
1 - 400
Beam:
(159.16, 158.87) -> (159.16, 158.82)
Distance:
139.43 -> 138.93
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.11 | 3.01 | 1.11 |
| Low resolution limit | 28.93 | 28.94 | 1.13 |
| Completeness | 90.4 | 93.7 | 50.2 |
| Multiplicity | 7.9 | 6.3 | 6.8 |
| I/sigma | 14.9 | 39.5 | 1.2 |
| Rmerge | 0.088 | 0.029 | 1.731 |
| CC half | 0.999 | 0.999 | 0.333 |
| Anomalous completeness | 90.0 | 92.9 | 49.9 |
| Anomalous multiplicity | 4.1 | 4.1 | 4.1 |
| Cell | 49.26 | 107.21 | 40.28 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/487/ac7460_high_1_###.img
Images:
1 - 400
Beam:
(159.16, 158.87) -> (159.16, 158.79)
Distance:
139.43 -> 138.73
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.16 | 3.15 | 1.16 |
| Low resolution limit | 49.25 | 49.3 | 1.18 |
| Completeness | 95.5 | 99.8 | 77.3 |
| Multiplicity | 4.2 | 4.0 | 3.7 |
| I/sigma | 10.9 | 43.0 | 0.9 |
| Rmerge | 0.096 | 0.107 | 0.904 |
| CC half | 0.955 | 0.87 | 0.428 |
| Anomalous completeness | 93.9 | 99.7 | 72.3 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 49.251 | 40.233 | 107.12 | 90.0 | 90.026 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
