Data DOI: 10.15785/SBGRID/486 | ID: 486
Publication DOI: 10.1074/jbc.RA118.001803
5OOH Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 9 Mar 2018
1. If this dataset is locally available, it should be accessable at /programs/datagrid/486
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/486 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/486 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/486 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/486 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 486 ; shasum -c files.sha'
Storage requirements: 3.6G
Biological Sample:
Human biliverdin IX beta reductase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID23EH1
Data Creation Date:
14 Apr 2010
Related Datasets:
Manso, JA.; Pereira, PJ.B.. 2018. "X-Ray Diffraction data for: Human biliverdin IX beta reductase. PDB Code 5OOH", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/486.
X-Ray Diffraction data from human biliverdin IX beta reductase - erythrosine extra bluish complex, source of 5OOH structure - low resolution pass
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Jose A. Manso | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/486/ac7460_1_###.img
Images:
1 - 200
Beam:
(159.1, 159.05) -> (159.1, 158.99)
Distance:
288.27 -> 287.91
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.51 | 4.1 | 1.51 |
| Low resolution limit | 40.21 | 40.22 | 1.54 |
| Completeness | 65.7 | 100.0 | 5.5 |
| Multiplicity | 7.4 | 7.2 | 2.2 |
| I/sigma | 31.4 | 51.7 | 1.7 |
| Rmerge | 0.043 | 0.025 | 0.494 |
| CC half | 0.999 | 0.999 | 0.461 |
| Anomalous completeness | 64.5 | 99.9 | 3.7 |
| Anomalous multiplicity | 4.0 | 4.0 | 4.0 |
| Cell | 49.25 | 107.26 | 40.21 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/486/ac7460_1_###.img
Images:
1 - 200
Beam:
(159.1, 159.05) -> (159.1, 159.0)
Distance:
288.27 -> 287.87
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.51 | 4.1 | 1.51 |
| Low resolution limit | 40.21 | 40.22 | 1.54 |
| Completeness | 65.7 | 100.0 | 5.5 |
| Multiplicity | 7.4 | 7.2 | 2.2 |
| I/sigma | 31.3 | 51.7 | 1.7 |
| Rmerge | 0.044 | 0.025 | 0.498 |
| CC half | 0.999 | 0.999 | 0.461 |
| Anomalous completeness | 64.5 | 99.9 | 3.7 |
| Anomalous multiplicity | 4.0 | 4.0 | 4.0 |
| Cell | 49.25 | 107.26 | 40.21 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9762
Sweep:
SWEEP1
Files:
/programs/datagrid/486/ac7460_1_###.img
Images:
1 - 200
Beam:
(159.1, 159.05) -> (159.1, 158.97)
Distance:
288.27 -> 287.63
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.8 | 1.77 |
| Low resolution limit | 107.17 | 107.36 | 1.8 |
| Completeness | 90.3 | 99.9 | 49.0 |
| Multiplicity | 4.0 | 3.9 | 3.3 |
| I/sigma | 40.0 | 75.4 | 20.5 |
| Rmerge | 0.048 | 0.031 | 0.383 |
| CC half | 0.989 | 0.981 | 0.285 |
| Anomalous completeness | 88.7 | 99.7 | 45.9 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 49.231 | 40.182 | 107.167 | 90.0 | 89.985 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
