Data DOI: 10.15785/SBGRID/466 | ID: 466
5OHZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: May 10, 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/466
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/466 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/466 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/466 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/466 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 466 ; shasum -c files.sha'
Storage requirements: 8.7G
Biological Sample:
Mycobacterial glucosylglycerate hydrolase - Se-Met derivative
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID29
Data Creation Date:
Nov. 27, 2015
Related Datasets:
Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - Se-Met derivative. PDB Code 5OHZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/466.
X-Ray Diffraction data from M. hassiacum GgH, source of 5OHZ structure - inflexion point
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Tatiana B. Cereija | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97923
Sweep:
SWEEP1
Files:
/programs/datagrid/466/bi1451_w1_6_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 212.34)
Distance:
344.16 -> 360.45
Spacegroup:
P 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.46 | 6.68 | 2.46 |
| Low resolution limit | 79.01 | 79.06 | 2.5 |
| Completeness | 99.9 | 99.7 | 99.6 |
| Multiplicity | 5.4 | 4.9 | 4.8 |
| I/sigma | 2.2 | 3.6 | 0.9 |
| Rmerge | 0.338 | 0.228 | 0.712 |
| CC half | 0.887 | 0.925 | 0.467 |
| Anomalous completeness | 99.0 | 98.0 | 97.1 |
| Anomalous multiplicity | 2.8 | 2.8 | 2.8 |
| Cell | 160.52 | 190.57 | 86.83 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97923
Sweep:
SWEEP1
Files:
/programs/datagrid/466/bi1451_w1_6_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 212.14)
Distance:
344.16 -> 344.67
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.92 | 2.18 |
| Low resolution limit | 76.28 | 76.33 | 2.22 |
| Completeness | 96.5 | 94.4 | 84.1 |
| Multiplicity | 2.8 | 2.9 | 2.8 |
| I/sigma | 1.8 | 2.6 | 1.0 |
| Rmerge | 0.199 | 0.093 | 0.561 |
| CC half | 0.932 | 0.91 | 0.747 |
| Anomalous completeness | 83.5 | 85.5 | 72.9 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 86.678 | 91.18 | 160.242 | 90.0 | 90.073 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
