X-Ray Diffraction data from Mycobacterial glucosylglycerate hydrolase - Se-Met derivative, source of 5OHZ structure

Data DOI: 10.15785/SBGRID/466 | ID: 466

5OHZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: May 10, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/466

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/466 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/466 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/466 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/466 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 466 ; shasum -c files.sha'

Storage requirements: 8.7G

Biological Sample:

Mycobacterial glucosylglycerate hydrolase - Se-Met derivative

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ESRF ID29

Data Creation Date:

Nov. 27, 2015

Related Datasets:

465


Cite this Dataset

Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - Se-Met derivative. PDB Code 5OHZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/466.

Download Citation

Dataset Description

X-Ray Diffraction data from M. hassiacum GgH, source of 5OHZ structure - inflexion point

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro J.B. PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Tatiana B. CereijaData CollectorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97923

Sweep:

SWEEP1

Files:

/programs/datagrid/466/bi1451_w1_6_####.cbf

Images:

1 - 1500

Beam:

(215.85, 211.73) -> (215.85, 212.34)

Distance:

344.16 -> 360.45

Spacegroup:

P 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.46 6.68 2.46
Low resolution limit 79.01 79.06 2.5
Completeness 99.9 99.7 99.6
Multiplicity 5.4 4.9 4.8
I/sigma 2.2 3.6 0.9
Rmerge 0.338 0.228 0.712
CC half 0.887 0.925 0.467
Anomalous completeness 99.0 98.0 97.1
Anomalous multiplicity 2.8 2.8 2.8
Cell 160.52 190.57 86.83 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97923

Sweep:

SWEEP1

Files:

/programs/datagrid/466/bi1451_w1_6_####.cbf

Images:

1 - 1500

Beam:

(215.85, 211.73) -> (215.85, 212.14)

Distance:

344.16 -> 344.67

Spacegroup:

P 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.18 5.92 2.18
Low resolution limit 76.28 76.33 2.22
Completeness 96.5 94.4 84.1
Multiplicity 2.8 2.9 2.8
I/sigma 1.8 2.6 1.0
Rmerge 0.199 0.093 0.561
CC half 0.932 0.91 0.747
Anomalous completeness 83.5 85.5 72.9
Anomalous multiplicity 1.5 1.5 1.5
Cell 86.678 91.18 160.242 90.0 90.073 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.