Data DOI: 10.15785/SBGRID/466 | ID: 466
5OHZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: May 10, 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/466
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/466 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/466 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/466 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/466 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 466 ; shasum -c files.sha'
Storage requirements: 8.7G
Biological Sample:
Mycobacterial glucosylglycerate hydrolase - Se-Met derivative
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID29
Data Creation Date:
Nov. 27, 2015
Related Datasets:
Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - Se-Met derivative. PDB Code 5OHZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/466.
X-Ray Diffraction data from M. hassiacum GgH, source of 5OHZ structure - inflexion point
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Tatiana B. Cereija | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97923
Sweep:
SWEEP1
Files:
/programs/datagrid/466/bi1451_w1_6_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 212.13)
Distance:
344.16 -> 347.63
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.9 | 5.16 | 1.9 |
| Low resolution limit | 58.65 | 58.68 | 1.93 |
| Completeness | 97.4 | 97.0 | 97.6 |
| Multiplicity | 2.8 | 2.8 | 2.8 |
| I/sigma | 6.1 | 15.9 | 0.9 |
| Rmerge | 0.087 | 0.044 | 1.14 |
| CC half | 0.99 | 0.989 | 0.308 |
| Anomalous completeness | 84.7 | 86.5 | 85.1 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 91.06 | 86.4 | 159.97 | 90.0 | 93.03 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97923
Sweep:
SWEEP1
Files:
/programs/datagrid/466/bi1451_w1_6_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 212.13)
Distance:
344.16 -> 345.26
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.26 | 6.13 | 2.26 |
| Low resolution limit | 74.35 | 74.39 | 2.3 |
| Completeness | 94.4 | 89.3 | 96.3 |
| Multiplicity | 2.5 | 2.5 | 2.5 |
| I/sigma | 3.2 | 7.3 | 0.7 |
| Rmerge | 0.145 | 0.055 | 1.231 |
| CC half | 0.862 | 0.868 | 0.355 |
| Anomalous completeness | 69.2 | 67.1 | 71.9 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 164.44 | 87.25 | 185.12 | 90.0 | 91.6 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
