Data DOI: 10.15785/SBGRID/465 | ID: 465
Publication DOI: 10.1107/S2052252519005372
5OHZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: May 3, 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/465
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/465 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/465 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/465 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/465 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 465 ; shasum -c files.sha'
Storage requirements: 8.7G
Biological Sample:
Mycobacterial glucosylglycerate hydrolase - Se-Met derivative
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID29
Data Creation Date:
Nov. 27, 2015
Related Datasets:
Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - Se-Met derivative. PDB Code 5OHZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/465.
X-Ray Diffraction data from M. hassiacum GgH, source of 5OHZ structure - peak dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Tatiana B. Cereija | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97908
Sweep:
SWEEP1
Files:
/programs/datagrid/465/bi1451_w1_2_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 210.82)
Distance:
344.18 -> 321.66
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.36 | 3.69 | 1.36 |
| Low resolution limit | 22.0 | 22.0 | 1.38 |
| Completeness | 35.0 | 84.9 | 0.5 |
| Multiplicity | 1.5 | 1.7 | 1.0 |
| I/sigma | 0.4 | 2.2 | 0.0 |
| Rmerge | 0.191 | 0.107 | 0.0 |
| CC half | 0.16 | -0.015 | 0.0 |
| Anomalous completeness | 16.1 | 54.8 | 0.0 |
| Anomalous multiplicity | 1.0 | 1.0 | 1.0 |
| Cell | 85.72 | 94.89 | 177.2 | 82.39 | 89.58 | 89.68 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97908
Sweep:
SWEEP1
Files:
/programs/datagrid/465/bi1451_w1_2_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 211.71)
Distance:
344.18 -> 343.02
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.89 | 5.13 | 1.89 |
| Low resolution limit | 75.72 | 75.78 | 1.92 |
| Completeness | 98.0 | 97.9 | 97.5 |
| Multiplicity | 2.8 | 2.8 | 2.8 |
| I/sigma | 0.7 | 1.7 | 0.1 |
| Rmerge | 0.49 | 0.394 | 2.84 |
| CC half | 0.69 | 0.615 | 0.089 |
| Anomalous completeness | 70.6 | 81.3 | 65.4 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 159.5 | 86.06 | 198.43 | 90.0 | 92.81 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
