Data DOI: 10.15785/SBGRID/465 | ID: 465
Publication DOI: 10.1107/S2052252519005372
5OHZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 3 May 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/465
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/465 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/465 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/465 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/465 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 465 ; shasum -c files.sha'
Storage requirements: 8.7G
Biological Sample:
Mycobacterial glucosylglycerate hydrolase - Se-Met derivative
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID29
Data Creation Date:
27 Nov 2015
Related Datasets:
Cereija, TB.; Pereira, PJ.B.. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase - Se-Met derivative. PDB Code 5OHZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/465.
X-Ray Diffraction data from M. hassiacum GgH, source of 5OHZ structure - peak dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro J.B. Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Tatiana B. Cereija | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97908
Sweep:
SWEEP1
Files:
/programs/datagrid/465/bi1451_w1_2_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 210.97)
Distance:
344.18 -> 335.95
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.26 | 11.09 | 4.26 |
| Low resolution limit | 22.24 | 22.24 | 4.33 |
| Completeness | 99.1 | 98.8 | 99.8 |
| Multiplicity | 4.5 | 4.7 | 4.4 |
| I/sigma | 1.6 | 1.5 | 1.6 |
| Rmerge | 0.564 | 0.73 | 0.542 |
| CC half | 0.377 | 0.311 | 0.361 |
| Anomalous completeness | 95.6 | 96.4 | 97.2 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 86.44 | 88.41 | 160.2 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97908
Sweep:
SWEEP1
Files:
/programs/datagrid/465/bi1451_w1_2_####.cbf
Images:
1 - 1500
Beam:
(215.85, 211.73) -> (215.85, 212.1)
Distance:
344.18 -> 345.35
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.92 | 5.21 | 1.92 |
| Low resolution limit | 73.3 | 73.35 | 1.95 |
| Completeness | 99.6 | 99.7 | 99.9 |
| Multiplicity | 5.4 | 5.2 | 5.6 |
| I/sigma | 3.9 | 9.1 | 0.7 |
| Rmerge | 0.197 | 0.082 | 2.226 |
| CC half | 0.99 | 0.987 | 0.349 |
| Anomalous completeness | 97.1 | 96.9 | 99.5 |
| Anomalous multiplicity | 2.8 | 2.8 | 2.8 |
| Cell | 86.4 | 160.16 | 181.99 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
