Data DOI: 10.15785/SBGRID/431 | ID: 431
Publication DOI: 10.1074/jbc.M117.788042
5NHU Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 30 Jun 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/431
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/431 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/431 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/431 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/431 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 431 ; shasum -c files.sha'
Storage requirements: 14G
Biological Sample:
Human thrombin - A. gambiae cE5 complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID30B
Data Creation Date:
7 May 2016
Related Datasets:
Ripoll-Rozada, J; Pereira, PJB. 2017. "X-Ray Diffraction data for: Human thrombin - A. gambiae cE5 complex. PDB Code 5NHU", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/431.
X-ray diffraction data from human thrombin - A. gambiae cE5 complex, source of structure 5NHU - dataset 2
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Data Collector, Depositor | IBMC-Instituto de Biologia Molecular e Celular |
| Jorge Ripoll-Rozada | Data Collector | IBMC-Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97264
Sweep:
SWEEP1
Files:
/programs/datagrid/431/bh3545_w1_1_####.cbf
Images:
1 - 2100
Beam:
(217.26, 209.56) -> (217.26, 209.87)
Distance:
243.88 -> 242.63
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.46 | 3.96 | 1.46 |
| Low resolution limit | 38.7 | 38.71 | 1.49 |
| Completeness | 93.3 | 89.0 | 95.0 |
| Multiplicity | 2.0 | 2.1 | 2.0 |
| I/sigma | 8.4 | 28.2 | 0.6 |
| Rmerge | 0.039 | 0.021 | 1.024 |
| CC half | 0.996 | 0.996 | 0.298 |
| Anomalous completeness | 54.1 | 65.0 | 48.7 |
| Anomalous multiplicity | 1.3 | 1.3 | 1.3 |
| Cell | 156.79 | 78.5 | 110.3 | 90.0 | 121.68 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97264
Sweep:
SWEEP1
Files:
/programs/datagrid/431/bh3545_w1_1_####.cbf
Images:
1 - 2100
Beam:
(217.26, 209.56) -> (217.26, 209.87)
Distance:
243.88 -> 243.34
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.46 | 3.96 | 1.46 |
| Low resolution limit | 63.48 | 63.54 | 1.49 |
| Completeness | 93.3 | 88.9 | 95.0 |
| Multiplicity | 2.0 | 2.1 | 2.0 |
| I/sigma | 8.4 | 28.3 | 0.6 |
| Rmerge | 0.039 | 0.021 | 1.016 |
| CC half | 0.996 | 0.996 | 0.297 |
| Anomalous completeness | 54.1 | 64.9 | 48.7 |
| Anomalous multiplicity | 1.3 | 1.3 | 1.3 |
| Cell | 156.79 | 78.49 | 110.3 | 90.0 | 121.68 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97264
Sweep:
SWEEP1
Files:
/programs/datagrid/431/bh3545_w1_1_####.cbf
Images:
1 - 2100
Beam:
(217.26, 209.56) -> (217.26, 209.88)
Distance:
243.88 -> 243.68
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.41 | 3.83 | 1.41 |
| Low resolution limit | 93.97 | 94.18 | 1.43 |
| Completeness | 93.3 | 89.7 | 91.7 |
| Multiplicity | 2.1 | 2.2 | 2.1 |
| I/sigma | 9.1 | 58.5 | 0.2 |
| Rmerge | 0.06 | 0.035 | 1.064 |
| CC half | 0.972 | 0.974 | 0.281 |
| Anomalous completeness | 57.3 | 71.2 | 51.1 |
| Anomalous multiplicity | 1.3 | 1.3 | 1.3 |
| Cell | 156.988 | 78.621 | 110.423 | 90.0 | 121.68 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
