Data DOI: 10.15785/SBGRID/223 | ID: 223
Publication DOI: 10.1038/nature15368
4RIL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Gonen Laboratory, University of California, Los Angeles
Release Date: 4 Mar 2016
Supersedes: 10.15785/SBGRID/193
1. If this dataset is locally available, it should be accessable at /programs/datagrid/223
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/223 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/223 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/223 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/223 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 223 ; shasum -c files.sha'
Storage requirements: 2.1G
Biological Sample:
alpha-synuclein
Dataset Type:
Microcrystal Electron Diffraction
Subject Composition:
Protein
Collection Facility:
FEI TF20 (Janelia Research Campus)
Data Creation Date:
25 Aug 2014
Related Datasets:
Reyes, FE; Rodriguez, JA; Gonen, T. 2016. "Microcrystal Electron Diffraction data for: alpha-synuclein. PDB Code 4RIL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/223.
Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Francis E Reyes | Depositor | HHMI Janelia Research Campus |
| Jose A Rodriguez | Data Collector | HHMI UCLA-DOE Institute |
| Tamir Gonen | PI | University of California, Los Angeles |
Convert the images to SMV: $ tvips2smv -d 1900 -r 0.3 -o movie3s1mt_60d_19/movie3s1mt_60d_19_###.img 193/movie3s1mt_60d_19_000.tvips $ tvips2smv -d 1860 -r 0.3 -o movie4s1mt_60d_05/movie4s1mt_60d_05_###.img 193/movie4s1mt_60d_05_000.tvips $ tvips2smv -d 1850 -r 0.3 -o movie4s1mt60d_06/movie4s1mt60d_06_###.img 193/movie4s1mt60d_06_000.tvips $ tvips2smv -d 1860 -r 0.3 -o movie4s1mt_60d_22/movie4s1mt_60d_22_###.img 193/movie4s1mt_60d_22_000.tvips MOSFLM processing parameters (all datasets): ADC offset: 0 Direction of spindle rotation: Forward Gain: 2
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
