Maintance Thur 2026 Nov 12

The SBDB will be undergoing infrastructure maintance Thur 2026 Nov 12 between 10AM and 6PM ET. Dataset registrations, dataset depositions, and dataset downloads from the primary location will be unavailable; API access will also be impacted.

Micro-Electron Diffraction data from alpha-synuclein, source of 4RIL structure

Data DOI: 10.15785/SBGRID/193 | ID: 193

Publication DOI: 10.1038/nature15368

4RIL Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Gonen Laboratory, University of California, Los Angeles

Release Date: 13 Nov 2015

Superseded by: 10.15785/SBGRID/223

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/193

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/193 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/193 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/193 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/193 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 193 ; shasum -c files.sha'

Storage requirements: 2.1G

Biological Sample:

alpha-synuclein

Dataset Type:

Microcrystal Electron Diffraction

Subject Composition:

Protein

Collection Facility:

Janelia Research Campus

Data Creation Date:

30 Jun 2015

Related Datasets:

223


Cite this Dataset

Superseded by: 10.15785/SBGRID/223

Reyes, FE; Rodriguez, JA; Gonen, T. 2015. "Microcrystal Electron Diffraction data for: alpha-synuclein. PDB Code 4RIL", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/193.

Dataset Description

Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction

Project Members

Name Additional Roles Affiliation While Working on the Project
Francis E ReyesDepositorJanelia Research Campus
Jose A RodriguezData CollectorHoward Hughes Medical Institute, UCLA-DOE Institute
Tamir GonenPIUniversity of California, Los Angeles

Reprocessing Instructions

none


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.