Data DOI: 10.15785/SBGRID/21 | ID: 21
Publication DOI: 10.7554/eLife.07367
4XGU Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 6 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/21
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/21 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/21 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/21 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/21 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 21 ; shasum -c files.sha'
Storage requirements: 3.2G
Biological Sample:
C. elegans PCH-2 SeMet
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Advanced Photon Source BL 24ID-E
Data Creation Date:
5 Dec 2013
Related Datasets:
Ye, Q; Corbett, KD. 2015. "X-Ray Diffraction data for: C. elegans PCH-2 SeMet. PDB Code 4XGU", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/21.
Selenomethionine dataset for C. elegans PCH-2
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Qiaozhen Ye | Data Collector | University of California, San Diego |
| Kevin D Corbett | Depositor, PI | University of California, San Diego |
Process with XDS to 3.23 Å with anomalous flags ON
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/21/ucsd_11_2_1_###.img
Images:
1 - 180
Beam:
(152.27, 158.67) -> (152.27, 158.75)
Distance:
450.0 -> 449.36
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.11 | 8.44 | 3.11 |
| Low resolution limit | 99.08 | 99.13 | 3.16 |
| Completeness | 99.9 | 99.1 | 100.0 |
| Multiplicity | 7.4 | 6.8 | 7.6 |
| I/sigma | 8.4 | 32.6 | 0.5 |
| Rmerge | 0.143 | 0.039 | 3.635 |
| CC half | 0.997 | 0.997 | 0.325 |
| Anomalous completeness | 99.8 | 99.2 | 99.8 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 126.09 | 239.51 | 198.16 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/21/ucsd_11_2_1_###.img
Images:
1 - 180
Beam:
(152.27, 158.67) -> (152.27, 158.76)
Distance:
450.0 -> 449.22
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.11 | 8.44 | 3.11 |
| Low resolution limit | 99.08 | 99.13 | 3.16 |
| Completeness | 99.9 | 99.0 | 100.0 |
| Multiplicity | 7.4 | 6.8 | 7.6 |
| I/sigma | 8.4 | 32.6 | 0.5 |
| Rmerge | 0.143 | 0.039 | 3.618 |
| CC half | 0.997 | 0.997 | 0.363 |
| Anomalous completeness | 99.8 | 99.2 | 99.8 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 126.1 | 239.51 | 198.16 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97921
Sweep:
SWEEP1
Files:
/programs/datagrid/21/ucsd_11_2_1_###.img
Images:
1 - 180
Beam:
(152.27, 158.67) -> (152.27, 158.74)
Distance:
450.0 -> 446.99
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.0 | 8.14 | 3.0 |
| Low resolution limit | 197.03 | 197.45 | 3.05 |
| Completeness | 100.0 | 100.0 | 98.4 |
| Multiplicity | 7.5 | 7.1 | 7.5 |
| I/sigma | 7.4 | 50.5 | 0.2 |
| Rmerge | 0.167 | 0.044 | 3.51 |
| CC half | 0.986 | 0.986 | 0.373 |
| Anomalous completeness | 99.9 | 100.0 | 98.4 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 125.366 | 238.143 | 197.027 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
