X-Ray Diffraction data from HSV-1 UL21 N-terminal domain, source of 4U4H structure

Data DOI: 10.15785/SBGRID/141 | ID: 141

Publication DOI: 10.1128/JVI.03516-14

4U4H Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Heldwein Laboratory, Tufts University School of Medicine

Release Date: 16 Jun 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/141

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/141 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/141 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/141 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/141 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 141 ; shasum -c files.sha'

Storage requirements: 1.5G

Biological Sample:

HSV-1 UL21 N-terminal domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

X25A, NSLS, Upton, NY

Data Creation Date:

1 Jul 2013

Related Datasets:

140


Cite this Dataset

Metrick, CM; Heroux, A; Heldwein, EE. 2015. "X-Ray Diffraction data for: HSV-1 UL21 N-terminal domain. PDB Code 4U4H", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/141.

Download Citation

Dataset Description

Hg dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Claire M MetrickDepositorTufts University
Ekaterina E HeldweinTufts University
Annie HerouxData CollectorNSLS
Ekaterina E HeldweinPITufts University School of Medicine

Reprocessing Instructions

Frames 1-180, x-beam 224.472, y-beam 222.671

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/141/CMM25_3_#####.cbf

Images:

1 - 256

Beam:

(224.39, 222.73) -> (224.39, 222.5)

Distance:

500.0 -> 501.94

Spacegroup:

P 63 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.25 6.1 2.25
Low resolution limit 32.63 32.63 2.29
Completeness 100.0 100.0 100.0
Multiplicity 24.0 19.8 13.2
I/sigma 14.3 49.7 0.5
Rmerge 0.166 0.049 5.197
CC half 0.999 1.0 0.456
Anomalous completeness 99.9 100.0 99.8
Anomalous multiplicity 13.2 13.2 13.2
Cell 109.48 109.48 65.26 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/141/CMM25_3_#####.cbf

Images:

1 - 256

Beam:

(224.39, 222.73) -> (224.39, 222.49)

Distance:

500.0 -> 502.48

Spacegroup:

P 63 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.26 6.12 2.26
Low resolution limit 35.84 35.84 2.3
Completeness 100.0 100.0 100.0
Multiplicity 24.2 19.8 13.7
I/sigma 14.5 49.6 0.1
Rmerge 0.165 0.049 494.697
CC half 0.999 1.0 0.301
Anomalous completeness 99.9 100.0 99.8
Anomalous multiplicity 13.3 13.3 13.3
Cell 109.48 109.48 65.26 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0

Sweep:

SWEEP1

Files:

/programs/datagrid/141/CMM25_3_#####.cbf

Images:

1 - 256

Beam:

(224.39, 222.73) -> (224.39, 222.5)

Distance:

500.0 -> 502.68

Spacegroup:

P 63 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.17 5.89 2.17
Low resolution limit 94.79 94.88 2.21
Completeness 100.0 100.0 99.5
Multiplicity 22.8 22.8 9.8
I/sigma 5.9 35.3 0.0
Rmerge 0.181 0.081 -5.502
CC half 0.999 0.999 0.259
Anomalous completeness 99.8 100.0 96.3
Anomalous multiplicity 12.5 12.5 12.5
Cell 109.451 109.451 65.274 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.