X-Ray Diffraction data from HSV-1 UL21 N-terminal domain, source of 4U4H structure

Data DOI: 10.15785/SBGRID/140 | ID: 140

Publication DOI: 10.1128/JVI.03516-14

4U4H Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Heldwein Laboratory, Tufts University School of Medicine

Release Date: June 16, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/140

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/140 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/140 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/140 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/140 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 140 ; shasum -c files.sha'

Storage requirements: 2.1G

Biological Sample:

HSV-1 UL21 N-terminal domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

X25A, NSLS, Upton, NY

Data Creation Date:

May 1, 2013

Related Datasets:

141


Cite this Dataset

Metrick, CM; Heroux, A; Heldwein, EE . 2015. "X-Ray Diffraction data for: HSV-1 UL21 N-terminal domain. PDB Code 4U4H", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/140.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Claire M MetrickDepositorTufts University
Ekaterina E HeldweinTufts University
Annie HerouxData CollectorNSLS
Ekaterina E HeldweinPITufts University School of Medicine

Reprocessing Instructions

Frames 50-150, high resolution 2.05A, x-beam 227.831, y-beam 234.039

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/140/CMM3_3_#####.cbf

Images:

1 - 360

Beam:

(227.73, 233.75) -> (227.73, 233.95)

Distance:

250.0 -> 249.14

Spacegroup:

P 63 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.74 4.72 1.74
Low resolution limit 54.24 54.27 1.77
Completeness 100.0 100.0 100.0
Multiplicity 17.6 16.1 18.1
I/sigma 9.5 21.8 1.3
Rmerge 0.187 0.129 3.493
CC half 0.986 0.974 0.575
Anomalous completeness 100.0 99.9 100.0
Anomalous multiplicity 9.5 9.5 9.5
Cell 108.488 108.488 65.301 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/140/CMM3_3_#####.cbf

Images:

1 - 360

Beam:

(227.73, 233.75) -> (227.73, 233.87)

Distance:

250.0 -> 248.75

Spacegroup:

P 63 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.84 4.99 1.84
Low resolution limit 38.12 38.13 1.87
Completeness 99.7 100.0 99.2
Multiplicity 18.7 15.6 18.8
I/sigma 16.6 41.3 1.4
Rmerge 0.09 0.053 2.88
CC half 0.999 0.999 0.685
Anomalous completeness 99.6 99.9 98.9
Anomalous multiplicity 10.1 10.1 10.1
Cell 108.44 108.44 65.28 90.0 90.0 120.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.1

Sweep:

SWEEP1

Files:

/programs/datagrid/140/CMM3_3_#####.cbf

Images:

1 - 360

Beam:

(227.73, 233.75) -> (227.73, 233.87)

Distance:

250.0 -> 248.69

Spacegroup:

P 63 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.78 4.83 1.78
Low resolution limit 65.28 65.33 1.81
Completeness 100.0 100.0 100.0
Multiplicity 18.7 16.9 18.8
I/sigma 13.0 31.1 1.6
Rmerge 0.108 0.058 2.896
CC half 0.999 0.998 0.807
Anomalous completeness 100.0 100.0 100.0
Anomalous multiplicity 10.1 10.1 10.1
Cell 108.464 108.464 65.285 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.