Data DOI: 10.15785/SBGRID/1263 | ID: 1263
Publication DOI: doi.org/10.1038/s42003-025-09319-7
Briegel Laboratory, Institut Pasteur
Release Date: 21 Apr 2026
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1263
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1263 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1263 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1263 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1263 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1263 ; shasum -c files.sha'
Storage requirements: 47G
Biological Sample:
CryoET tilt-series of Agrobacterium jumbo phage 7-7-1 and bacterial flagella
Dataset Type:
CryoET Training
Subject Composition:
Protein
Collection Facility:
Netherlands Centre for Electron Nanoscopy (NeCEN)
Data Creation Date:
28 May 2021
Related Datasets:
None
Eruera, A; Hoeksma, T; Noteborn, WEM; Ouyang, R; Briegel, A. 2026. "CryoET Training data for: CryoET tilt-series of Agrobacterium jumbo phage 7-7-1 and bacterial flagella.", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1263.
Two raw tilt-series (in MRC format) of highly-purified jumbo bacteriophage in association with bacterial flagella. MDOC files are also provided.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Alice-Roza Eruera | Depositor | Harvard Medical School |
| Ariane Briegel | Data Collector | Leiden University |
| Tino Hoeksma | Data Collector | Utrecht University |
| Willem EM Noteborn | Data Collector | Leiden University |
| Ruochen Ouyang | Data Collector | Leiden University |
| Ariane Briegel | PI | Institut Pasteur |
Full processing instructions are provided with the accompanying PDF file (at https://docs.google.com/document/d/1_d9k804CHZmFb-xlB6qlIH3qU-s9Wc7nYO2zq84w2LI/edit?tab=t.0#heading=h.o6an2zo5oo6n) , as well as all relevant scripts and an accompanying video tutorial (at https://www.youtube.com/@CryoETChallenge).
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.