Data DOI: 10.15785/SBGRID/122 | ID: 122
Publication DOI: 10.1126/science.1126548
2GUM Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Heldwein Laboratory, Tufts University School of Medicine
Release Date: 21 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/122
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/122 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/122 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/122 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/122 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 122 ; shasum -c files.sha'
Storage requirements: 7.2G
Biological Sample:
HSV-1 glycoprotein B
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-C
Data Creation Date:
19 Aug 2005
Related Datasets:
Heldwein, EE. 2015. "X-Ray Diffraction data for: HSV-1 glycoprotein B. PDB Code 2GUM", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/122.
This is a selenomethionine single-wavelength anomalous diffraction data set collected at 0.97950 angstrom using inverse beam strategy
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Ekaterina E Heldwein | Data Collector, Depositor | Children's Hospital Boston/Harvard Medical School |
| Ekaterina E Heldwein | PI | Tufts University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP2
Files:
/programs/datagrid/122/tryp_smet_24_peak_101_###.img
Images:
1 - 190
Beam:
(156.09, 156.4) -> (156.09, 155.87)
Distance:
400.0 -> 400.81
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.57 | 6.97 | 2.57 |
| Low resolution limit | 48.38 | 48.39 | 2.61 |
| Completeness | 97.0 | 99.0 | 79.4 |
| Multiplicity | 4.1 | 4.1 | 3.6 |
| I/sigma | 7.5 | 21.5 | 0.9 |
| Rmerge | 0.108 | 0.045 | 1.446 |
| CC half | 0.988 | 0.978 | 0.432 |
| Anomalous completeness | 96.0 | 97.3 | 74.3 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 85.44 | 100.26 | 100.37 | 67.22 | 69.98 | 78.08 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP2
Files:
/programs/datagrid/122/tryp_smet_24_peak_101_###.img
Images:
1 - 190
Beam:
(156.09, 156.4) -> (156.09, 155.87)
Distance:
400.0 -> 400.57
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.58 | 7.0 | 2.58 |
| Low resolution limit | 70.41 | 70.43 | 2.62 |
| Completeness | 97.3 | 99.0 | 82.1 |
| Multiplicity | 4.1 | 4.1 | 4.1 |
| I/sigma | 7.6 | 21.5 | 0.9 |
| Rmerge | 0.108 | 0.045 | 1.448 |
| CC half | 0.99 | 0.983 | 0.5 |
| Anomalous completeness | 96.5 | 97.3 | 79.9 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 85.44 | 100.26 | 100.37 | 67.22 | 69.98 | 78.08 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9795
Sweep:
SWEEP2
Files:
/programs/datagrid/122/tryp_smet_24_peak_101_###.img
Images:
1 - 190
Beam:
(156.09, 156.4) -> (156.09, 155.85)
Distance:
400.0 -> 400.69
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.51 | 6.81 | 2.51 |
| Low resolution limit | 70.39 | 70.42 | 2.55 |
| Completeness | 95.7 | 99.7 | 66.8 |
| Multiplicity | 4.2 | 4.1 | 4.1 |
| I/sigma | 10.0 | 48.0 | 0.4 |
| Rmerge | 0.106 | 0.058 | 1.626 |
| CC half | 0.986 | 0.97 | 0.546 |
| Anomalous completeness | 94.8 | 99.0 | 63.8 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 85.413 | 100.271 | 100.399 | 67.23 | 70.003 | 78.082 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
