Data DOI: 10.15785/SBGRID/995 | ID: 995
7P5L Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 24 Feb 2023
1. If this dataset is locally available, it should be accessable at /programs/datagrid/995
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/995 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/995 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/995 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/995 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 995 ; shasum -c files.sha'
Storage requirements: 7.1G
Biological Sample:
Mycobacterial glucosyl-3-phosphoglycerate synthase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID29
Data Creation Date:
20 Jun 2013
Related Datasets:
None
Pereira, PJB. 2023. "X-Ray Diffraction data for: Mycobacterial glucosyl-3-phosphoglycerate synthase. PDB Code 7P5L", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/995.
X-Ray Diffraction data from M. hassiacum GpgS, source of 7P5L structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.96112
Sweep:
SWEEP1
Files:
/programs/datagrid/995/ac7043w1_1_####.cbf
Images:
1 - 1200
Beam:
(215.7, 211.44) -> (215.7, 211.25)
Distance:
192.41 -> 198.69
Spacegroup:
P 42 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 0.99 | 2.68 | 0.99 |
| Low resolution limit | 34.94 | 34.96 | 1.0 |
| Completeness | 85.0 | 99.1 | 4.9 |
| Multiplicity | 6.4 | 5.6 | 1.1 |
| I/sigma | 0.4 | 1.6 | -0.2 |
| Rmerge | 0.627 | 0.495 | -1.576 |
| CC half | 0.66 | 0.479 | -0.365 |
| Anomalous completeness | 76.5 | 84.5 | 0.3 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 89.93 | 89.93 | 70.52 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.96112
Sweep:
SWEEP1
Files:
/programs/datagrid/995/ac7043w1_1_####.cbf
Images:
1 - 1200
Beam:
(215.7, 211.44) -> (215.7, 211.39)
Distance:
192.41 -> 198.51
Spacegroup:
P 42 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 0.99 | 2.68 | 0.99 |
| Low resolution limit | 47.24 | 47.3 | 1.0 |
| Completeness | 85.1 | 99.2 | 4.9 |
| Multiplicity | 6.4 | 5.5 | 1.1 |
| I/sigma | 0.4 | 1.6 | -0.2 |
| Rmerge | 0.633 | 0.501 | -1.271 |
| CC half | 0.376 | 0.437 | -0.362 |
| Anomalous completeness | 76.4 | 82.4 | 0.4 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 89.96 | 89.96 | 70.55 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.96112
Sweep:
SWEEP1
Files:
/programs/datagrid/995/ac7043w1_1_####.cbf
Images:
1 - 1200
Beam:
(215.7, 211.44) -> (215.7, 211.86)
Distance:
192.41 -> 191.13
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.1 | 2.98 | 1.1 |
| Low resolution limit | 65.61 | 65.73 | 1.12 |
| Completeness | 98.1 | 99.9 | 82.0 |
| Multiplicity | 3.9 | 4.4 | 1.8 |
| I/sigma | 11.2 | 63.0 | 0.4 |
| Rmerge | 0.332 | 0.031 | 0.788 |
| CC half | 0.002 | 0.994 | 0.386 |
| Anomalous completeness | 88.4 | 97.0 | 38.2 |
| Anomalous multiplicity | 2.1 | 2.1 | 2.1 |
| Cell | 71.071 | 90.566 | 95.187 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
