X-Ray Diffraction data from Imine reductase from Mycobacterium smegmatis, source of 6SMT structure

Data DOI: 10.15785/SBGRID/985 | ID: 985

Publication DOI: 10.3390/biom10081130

6SMT Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Niemann Laboratory, Bielefeld University

Release Date: 17 Jan 2023

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/985

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/985 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/985 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/985 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/985 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 985 ; shasum -c files.sha'

Storage requirements: 21G

Biological Sample:

Imine reductase from Mycobacterium smegmatis

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

beamline P13, operated by EMBL Hamburg at the PETRA III storage ring (DESY, Hamburg, Germany)

Data Creation Date:

18 Sep 2018

Related Datasets:

None


Cite this Dataset

Gilzer, D; Moritzer, A; Niemann, HH. 2023. "X-Ray Diffraction data for: Imine reductase from Mycobacterium smegmatis. PDB Code 6SMT", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/985.

Download Citation

Dataset Description

native data

Project Members

Name Additional Roles Affiliation While Working on the Project
Hartmut H NiemannDepositorBielefeld University, Department of Chemistry
Dominic GilzerData CollectorBielefeld University, Department of Chemistry
Ann-Christin MoritzerData CollectorBielefeld University, Department of Chemistry
Hartmut NiemannPIBielefeld University

Reprocessing Instructions

XDS.INP file used for processing is given as template.

Processing Bundle

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97625

Sweep:

SWEEP1

Files:

/programs/datagrid/985/nh198_4_data_1_#####.cbf

Images:

1 - 3600

Beam:

(216.05, 210.25) -> (216.05, 209.61)

Distance:

294.67 -> 295.14

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.3 3.53 1.3
Low resolution limit 29.92 29.92 1.32
Completeness 78.5 99.7 20.6
Multiplicity 6.4 6.6 3.8
I/sigma 15.2 32.6 0.8
Rmerge 0.056 0.048 1.063
CC half 0.997 0.995 0.326
Anomalous completeness 77.1 98.3 18.6
Anomalous multiplicity 3.2 3.2 3.2
Cell 226.63 77.05 117.02 90.0 120.85 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97625

Sweep:

SWEEP1

Files:

/programs/datagrid/985/nh198_4_data_1_#####.cbf

Images:

1 - 3600

Beam:

(216.05, 210.25) -> (216.05, 209.6)

Distance:

294.67 -> 294.87

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.3 3.53 1.3
Low resolution limit 71.64 71.75 1.32
Completeness 78.5 99.7 20.6
Multiplicity 6.3 6.6 3.8
I/sigma 15.2 32.6 0.8
Rmerge 0.056 0.048 1.062
CC half 0.997 0.995 0.322
Anomalous completeness 77.1 98.3 18.6
Anomalous multiplicity 3.2 3.2 3.2
Cell 226.63 77.05 117.02 90.0 120.85 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97625

Sweep:

SWEEP1

Files:

/programs/datagrid/985/nh198_4_data_1_#####.cbf

Images:

1 - 3600

Beam:

(216.05, 210.25) -> (216.05, 209.6)

Distance:

294.67 -> 294.97

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.25 3.4 1.25
Low resolution limit 71.58 71.7 1.27
Completeness 71.3 99.8 4.7
Multiplicity 6.3 6.7 2.3
I/sigma 16.7 49.2 0.4
Rmerge 0.058 0.05 0.95
CC half 0.994 0.991 0.326
Anomalous completeness 69.9 99.5 2.4
Anomalous multiplicity 3.2 3.2 3.2
Cell 226.495 76.989 116.939 90.0 120.839 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.