Data DOI: 10.15785/SBGRID/976 | ID: 976
8FFE Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 3 Mar 2023
1. If this dataset is locally available, it should be accessable at /programs/datagrid/976
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/976 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/976 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/976 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/976 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 976 ; shasum -c files.sha'
Storage requirements: 31G
Biological Sample:
LRP6 bound to YW210.09 Fab and engineered Wnt NC peptide
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-1, SSRL
Data Creation Date:
14 Dec 2022
Related Datasets:
Jude, KM; Garcia, KC; Garcia, K. 2023. "X-Ray Diffraction data for: LRP6 bound to YW210.09 Fab and engineered Wnt NC peptide. PDB Code 8FFE", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/976.
High resolution dataset used in refinement
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | HHMI, Stanford University |
| K C Garcia | HHMI/Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/976/B5_1_#####.cbf
Images:
1 - 1800
Beam:
(163.61, 155.59) -> (163.61, 155.66)
Distance:
275.0 -> 275.05
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.67 | 4.53 | 1.67 |
| Low resolution limit | 44.6 | 44.62 | 1.7 |
| Completeness | 86.9 | 96.2 | 42.9 |
| Multiplicity | 7.1 | 7.0 | 6.4 |
| I/sigma | 9.5 | 23.4 | 0.7 |
| Rmerge | 0.099 | 0.061 | 2.087 |
| CC half | 0.997 | 0.996 | 0.289 |
| Anomalous completeness | 86.2 | 95.2 | 42.3 |
| Anomalous multiplicity | 3.6 | 3.6 | 3.6 |
| Cell | 125.12 | 91.34 | 103.92 | 90.0 | 103.73 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
