X-Ray Diffraction data from Cadmium-bound WT Nramp/MntH divalent transition metal transporter from Deinococcus radiodurans, source of 8E6M structure

Data DOI: 10.15785/SBGRID/969 | ID: 969

Publication DOI: 10.7554/eLife.84006

8E6M Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Gaudet Laboratory, Harvard University

Release Date: May 2, 2023

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/969

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/969 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/969 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/969 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/969 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 969 ; shasum -c files.sha'

Storage requirements: 3.5G

Biological Sample:

Cadmium-bound WT Nramp/MntH divalent transition metal transporter from Deinococcus radiodurans

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

Beamline 24-ID-C with Dectris Eiger2 X 16M detector, NE-CAT, APS, Chicago, IL

Data Creation Date:

Dec. 7, 2018

Related Datasets:


Cite this Dataset

Ray, S; Gaudet, R. 2023. "X-Ray Diffraction data for: Cadmium-bound WT Nramp/MntH divalent transition metal transporter from Deinococcus radiodurans. PDB Code 8E6M", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/969.

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Dataset Description

High resolution dataset collected from a single WT LCP crystal soaked in precipitant having cadmium.

Project Members

Name Additional Roles Affiliation While Working on the Project
Shamayeeta RayData Collector, DepositorHarvard University
Rachelle GaudetData Collector, PIHarvard University

Reprocessing Instructions

Data was processed using XDS, indexed using POINTLESS in space group P22121, and scaled using AIMLESS at 2.48A.

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.