X-Ray Diffraction data from LapD output domain in complex with LapG, source of 4U65 structure

Data DOI: 10.15785/SBGRID/94 | ID: 94

Publication DOI: 10.7554/eLife.03650

4U65 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Sondermann Laboratory, Cornell University

Release Date: May 19, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/94

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/94 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/94 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/94 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/94 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 94 ; shasum -c files.sha'

Storage requirements: 1.8G

Biological Sample:

LapD output domain in complex with LapG

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

CHESS A1

Data Creation Date:

March 3, 2012

Related Datasets:

None


Cite this Dataset

Sondermann, H. 2015. "X-Ray Diffraction data for: LapD output domain in complex with LapG. PDB Code 4U65", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/94.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Holger SondermannData Collector, Depositor, PICornell University

Reprocessing Instructions

beam center x=99.3 , y=100.0 indexed in P21 with HKL2000 DIstance is 217 (not 220 as indicated in the header)

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9767

Sweep:

SWEEP1

Files:

/programs/datagrid/94/dccpx9_1_###.img

Images:

1 - 220

Beam:

(99.42, 109.29) -> (99.42, 110.11)

Distance:

220.0 -> 217.6

Spacegroup:

P 4

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.44 3.92 1.44
Low resolution limit 34.31 34.32 1.47
Completeness 67.3 99.7 0.9
Multiplicity 6.4 7.9 1.0
I/sigma 0.3 0.8 -0.2
Rmerge 1.516 0.964 0.0
CC half 0.423 0.571 0.0
Anomalous completeness 55.4 96.1 0.0
Anomalous multiplicity 3.5 3.5 3.5
Cell 68.62 68.62 81.64 90.0 90.0 90.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9767

Sweep:

SWEEP1

Files:

/programs/datagrid/94/dccpx9_1_###.img

Images:

1 - 220

Beam:

(99.42, 109.29) -> (99.42, 110.24)

Distance:

220.0 -> 215.89

Spacegroup:

P 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.57 4.26 1.57
Low resolution limit 74.98 75.06 1.6
Completeness 28.0 45.5 0.5
Multiplicity 1.1 1.4 1.0
I/sigma 0.5 2.0 -0.2
Rmerge 1.446 -3.165 0.0
CC half -0.002 -0.021 0.0
Anomalous completeness 4.0 20.1 0.0
Anomalous multiplicity 1.0 1.0 1.0
Cell 75.115 76.559 87.718 93.471 91.31 88.757

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.