Data DOI: 10.15785/SBGRID/94 | ID: 94
Publication DOI: 10.7554/eLife.03650
4U65 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Sondermann Laboratory, Cornell University
Release Date: 19 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/94
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/94 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/94 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/94 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/94 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 94 ; shasum -c files.sha'
Storage requirements: 1.8G
Biological Sample:
LapD output domain in complex with LapG
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
CHESS A1
Data Creation Date:
3 Mar 2012
Related Datasets:
None
Sondermann, H. 2015. "X-Ray Diffraction data for: LapD output domain in complex with LapG. PDB Code 4U65", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/94.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Holger Sondermann | Data Collector, Depositor, PI | Cornell University |
beam center x=99.3 , y=100.0 indexed in P21 with HKL2000 DIstance is 217 (not 220 as indicated in the header)
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9767
Sweep:
SWEEP1
Files:
/programs/datagrid/94/dccpx9_1_###.img
Images:
1 - 220
Beam:
(99.42, 109.29) -> (99.42, 110.39)
Distance:
220.0 -> 213.93
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.61 | 4.37 | 1.61 |
| Low resolution limit | 69.93 | 70.0 | 1.64 |
| Completeness | 52.3 | 99.1 | 0.2 |
| Multiplicity | 3.6 | 4.0 | 1.0 |
| I/sigma | 0.0 | 0.3 | -0.1 |
| Rmerge | 2.291 | 1.434 | 0.0 |
| CC half | 0.023 | 0.04 | 0.0 |
| Anomalous completeness | 44.4 | 96.3 | 0.0 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 125.47 | 107.98 | 117.76 | 90.0 | 98.22 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9767
Sweep:
SWEEP1
Files:
/programs/datagrid/94/dccpx9_1_###.img
Images:
1 - 220
Beam:
(99.42, 109.29) -> (99.42, 110.24)
Distance:
220.0 -> 209.66
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.54 | 4.17 | 1.54 |
| Low resolution limit | 51.63 | 51.66 | 1.56 |
| Completeness | 59.1 | 99.8 | 0.6 |
| Multiplicity | 3.7 | 4.1 | 1.0 |
| I/sigma | 0.9 | 6.2 | 0.0 |
| Rmerge | 1.964 | 0.958 | 0.0 |
| CC half | 0.141 | 0.179 | 0.0 |
| Anomalous completeness | 49.6 | 96.1 | 0.0 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 103.448 | 104.021 | 86.721 | 90.0 | 93.455 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
