Data DOI: 10.15785/SBGRID/917 | ID: 917
Publication DOI: 10.1038/s41586-022-05501-7
7N2P Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 9 Dec 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/917
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/917 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/917 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/917 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/917 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 917 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
AS4.3-RNASEH2b-HLA*B27
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ALS 2.0.1
Data Creation Date:
1 Sep 2022
Related Datasets:
None
Jude, KM; Garcia, KC; Yang, X; Garcia, K. 2022. "X-Ray Diffraction data for: AS4.3-RNASEH2b-HLA*B27. PDB Code 7N2P", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/917.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | HHMI/Stanford University |
| K C Garcia | HHMI/Stanford University | |
| Xinbo Yang | Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
The crystal to detector distance in the image header is incorrect. The correct distance is 390 mm. The first 480 frames were used for structure solution.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.04601
Sweep:
SWEEP1
Files:
/programs/datagrid/917/E12_30_#####.cbf
Images:
1 - 900
Beam:
(219.47, 204.51) -> (219.47, 204.79)
Distance:
250.0 -> 279.27
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.29 | 3.49 | 1.29 |
| Low resolution limit | 27.09 | 27.09 | 1.31 |
| Completeness | 42.7 | 99.4 | 0.1 |
| Multiplicity | 4.0 | 7.5 | 1.0 |
| I/sigma | 0.0 | 0.0 | 0.1 |
| Rmerge | 4.609 | 5.216 | 0.0 |
| CC half | 0.076 | 0.382 | 0.0 |
| Anomalous completeness | 28.0 | 99.0 | 0.0 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 66.61 | 109.36 | 198.94 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
