Data DOI: 10.15785/SBGRID/916 | ID: 916
Publication DOI: 10.1038/s41586-022-05501-7
7N2S Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 9 Dec 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/916
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/916 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/916 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/916 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/916 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 916 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
AS3.1-PRPF3-HLA*B27
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-2, SSRL
Data Creation Date:
28 Feb 2020
Related Datasets:
None
Jude, KM; Garcia, KC; Yang, X; Garcia, K. 2022. "X-Ray Diffraction data for: AS3.1-PRPF3-HLA*B27. PDB Code 7N2S", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/916.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | HHMI/Stanford University |
| K C Garcia | HHMI/Stanford University | |
| Xinbo Yang | Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/916/1449-4_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.92)
Distance:
400.0 -> 398.19
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.65 | 7.18 | 2.65 |
| Low resolution limit | 40.35 | 40.36 | 2.7 |
| Completeness | 97.2 | 96.2 | 97.7 |
| Multiplicity | 3.3 | 3.1 | 3.3 |
| I/sigma | 4.7 | 18.1 | 0.4 |
| Rmerge | 0.29 | 0.043 | 4.084 |
| CC half | 0.953 | 0.993 | 0.15 |
| Anomalous completeness | 90.4 | 87.4 | 89.9 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 83.19 | 52.78 | 106.31 | 90.0 | 98.27 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/916/1449-4_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.91)
Distance:
400.0 -> 399.25
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.65 | 7.19 | 2.65 |
| Low resolution limit | 47.17 | 47.18 | 2.7 |
| Completeness | 97.4 | 96.7 | 97.7 |
| Multiplicity | 3.3 | 3.1 | 3.3 |
| I/sigma | 4.9 | 18.7 | 0.4 |
| Rmerge | 0.269 | 0.041 | 2.769 |
| CC half | 0.959 | 0.996 | 0.223 |
| Anomalous completeness | 90.9 | 87.9 | 89.5 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 83.17 | 52.77 | 106.3 | 90.0 | 98.26 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/916/1449-4_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.9)
Distance:
400.0 -> 400.65
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.64 | 7.15 | 2.64 |
| Low resolution limit | 47.24 | 47.25 | 2.68 |
| Completeness | 95.0 | 95.6 | 94.5 |
| Multiplicity | 3.2 | 3.2 | 3.1 |
| I/sigma | 6.3 | 13.2 | 4.4 |
| Rmerge | 0.377 | 0.089 | 1.032 |
| CC half | 0.647 | 0.977 | 0.065 |
| Anomalous completeness | 89.5 | 94.4 | 87.3 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 83.261 | 52.84 | 106.544 | 90.0 | 98.32 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
