Data DOI: 10.15785/SBGRID/879 | ID: 879
8DGQ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: 28 Oct 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/879
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/879 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/879 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/879 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/879 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 879 ; shasum -c files.sha'
Storage requirements: 8.4G
Biological Sample:
p120RasGAP SH2-SH3-SH2 in complex with p190RhoGAP doubly phosphorylated peptide
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS BEAMLINE 24-ID-C
Data Creation Date:
14 Feb 2019
Related Datasets:
None
Stiegler, AL; Vish, KJ; Boggon, TJ. 2022. "X-Ray Diffraction data for: p120RasGAP SH2-SH3-SH2 in complex with p190RhoGAP doubly phosphorylated peptide. PDB Code 8DGQ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/879.
Four sweeps
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Titus J Boggon | Depositor | Yale University |
| Amy L Stiegler | Data Collector | Yale University |
| Kimberly J Vish | Yale University | |
| Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP4
Files:
/programs/datagrid/879/TJB2_14_Amy_2_2_####.cbf
Images:
1 - 360
Beam:
(216.81, 225.41) -> (216.81, 225.45)
Distance:
350.0 -> 349.83
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.85 | 5.02 | 1.85 |
| Low resolution limit | 113.4 | 113.61 | 1.88 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 22.2 | 24.1 | 7.1 |
| I/sigma | 10.7 | 28.2 | 0.7 |
| Rmerge | 0.181 | 0.088 | 2.356 |
| CC half | 0.998 | 0.997 | 0.307 |
| Anomalous completeness | 99.9 | 100.0 | 99.0 |
| Anomalous multiplicity | 11.7 | 11.7 | 11.7 |
| Cell | 55.01 | 113.4 | 118.68 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP4
Files:
/programs/datagrid/879/TJB2_14_Amy_2_2_####.cbf
Images:
1 - 360
Beam:
(216.81, 225.41) -> (216.81, 225.44)
Distance:
350.0 -> 349.69
Spacegroup:
P 2 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.8 | 1.77 |
| Low resolution limit | 118.7 | 118.97 | 1.8 |
| Completeness | 99.9 | 100.0 | 97.6 |
| Multiplicity | 25.6 | 25.0 | 24.2 |
| I/sigma | 5.6 | 19.8 | 0.4 |
| Rmerge | 0.271 | 0.113 | 4.275 |
| CC half | 0.996 | 0.997 | 0.472 |
| Anomalous completeness | 99.9 | 100.0 | 97.5 |
| Anomalous multiplicity | 13.4 | 13.4 | 13.4 |
| Cell | 55.017 | 113.226 | 118.698 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
