Data DOI: 10.15785/SBGRID/876 | ID: 876
Publication DOI: 10.1038/s41467-022-32541-4
7TPB Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Boggon Laboratory, Yale University School of Medicine
Release Date: 28 Oct 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/876
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/876 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/876 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/876 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/876 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 876 ; shasum -c files.sha'
Storage requirements: 17G
Biological Sample:
p120RasGAP SH3 domain in complex with DLC1 GAP domain
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS BEAMLINE 24-ID-E
Data Creation Date:
11 Jul 2019
Related Datasets:
None
Stiegler, AL; Boggon, TJ. 2022. "X-Ray Diffraction data for: p120RasGAP SH3 domain in complex with DLC1 GAP domain. PDB Code 7TPB", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/876.
Two sweeps, native
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Titus J Boggon | Depositor | Yale University |
| Amy L Stiegler | Data Collector | Yale University |
| Titus Boggon | PI | Yale University School of Medicine |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP2
Files:
/programs/datagrid/876/TJB_10_3_2_1_######.cbf
Images:
1 - 360
Beam:
(164.41, 154.49) -> (164.41, 154.47)
Distance:
430.0 -> 430.19
Spacegroup:
H 3
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.13 | 8.47 | 3.13 |
| Low resolution limit | 41.39 | 41.39 | 3.18 |
| Completeness | 100.0 | 99.9 | 99.8 |
| Multiplicity | 9.8 | 10.2 | 5.1 |
| I/sigma | 9.2 | 30.3 | 1.0 |
| Rmerge | 0.188 | 0.073 | 1.54 |
| CC half | 0.997 | 0.996 | 0.222 |
| Anomalous completeness | 98.7 | 99.3 | 96.4 |
| Anomalous multiplicity | 4.9 | 4.9 | 4.9 |
| Cell | 143.38 | 143.38 | 152.06 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP2
Files:
/programs/datagrid/876/TJB_10_3_2_1_######.cbf
Images:
1 - 360
Beam:
(164.41, 154.49) -> (164.41, 154.46)
Distance:
430.0 -> 429.65
Spacegroup:
H 3
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.13 | 8.49 | 3.13 |
| Low resolution limit | 57.48 | 57.49 | 3.18 |
| Completeness | 100.0 | 100.0 | 99.8 |
| Multiplicity | 9.8 | 10.2 | 5.1 |
| I/sigma | 9.3 | 31.1 | 1.0 |
| Rmerge | 0.187 | 0.073 | 1.559 |
| CC half | 0.998 | 0.998 | 0.233 |
| Anomalous completeness | 98.7 | 99.3 | 96.4 |
| Anomalous multiplicity | 4.9 | 4.9 | 4.9 |
| Cell | 143.39 | 143.39 | 152.07 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP2
Files:
/programs/datagrid/876/TJB_10_3_2_1_######.cbf
Images:
1 - 360
Beam:
(164.41, 154.49) -> (164.41, 154.48)
Distance:
430.0 -> 423.58
Spacegroup:
R 3
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.01 | 8.15 | 3.01 |
| Low resolution limit | 64.72 | 64.74 | 3.06 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 10.8 | 10.7 | 10.8 |
| I/sigma | 4.2 | 28.3 | 0.2 |
| Rmerge | 0.241 | 0.092 | 2.869 |
| CC half | 0.996 | 0.998 | 0.404 |
| Anomalous completeness | 99.2 | 99.7 | 98.6 |
| Anomalous multiplicity | 5.4 | 5.4 | 5.4 |
| Cell | 143.17 | 143.17 | 151.761 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
