Data DOI: 10.15785/SBGRID/874 | ID: 874
Publication DOI: 10.1038/s42003-023-04448-3
7QSJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 24 Jan 2023
1. If this dataset is locally available, it should be accessable at /programs/datagrid/874
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/874 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/874 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/874 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/874 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 874 ; shasum -c files.sha'
Storage requirements: 8.4G
Biological Sample:
Mycobacterial methylmannose polysaccharide hydrolase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
BL13-XALOC ALBA
Data Creation Date:
29 Oct 2014
Related Datasets:
None
Manso, JA; Ripoll-Rozada, J; Pereira, P. 2023. "X-Ray Diffraction data for: Mycobacterial methylmannose polysaccharide hydrolase. PDB Code 7QSJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/874.
X-Ray Diffraction data from M. hassiacum MmpH, source of 7QSJ structure (native data set)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Jose A Manso | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Jorge Ripoll-Rozada | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.98086
Sweep:
SWEEP1
Files:
/programs/datagrid/874/BI1917_3_####.cbf
Images:
1 - 1440
Beam:
(224.22, 212.54) -> (224.22, 212.58)
Distance:
241.95 -> 240.88
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.26 | 3.42 | 1.26 |
| Low resolution limit | 35.8 | 35.81 | 1.28 |
| Completeness | 96.1 | 99.7 | 65.6 |
| Multiplicity | 6.2 | 6.5 | 4.1 |
| I/sigma | 14.5 | 59.4 | 0.5 |
| Rmerge | 0.046 | 0.019 | 2.237 |
| CC half | 1.0 | 1.0 | 0.331 |
| Anomalous completeness | 95.0 | 98.8 | 63.1 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 47.03 | 51.81 | 149.13 | 90.0 | 95.1 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.98086
Sweep:
SWEEP1
Files:
/programs/datagrid/874/BI1917_3_####.cbf
Images:
1 - 1440
Beam:
(224.22, 212.54) -> (224.22, 212.58)
Distance:
241.95 -> 240.97
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.26 | 3.42 | 1.26 |
| Low resolution limit | 46.84 | 46.88 | 1.28 |
| Completeness | 96.1 | 99.7 | 65.6 |
| Multiplicity | 6.2 | 6.5 | 4.1 |
| I/sigma | 14.5 | 59.3 | 0.5 |
| Rmerge | 0.046 | 0.019 | 2.235 |
| CC half | 1.0 | 1.0 | 0.33 |
| Anomalous completeness | 95.0 | 98.8 | 63.2 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 47.03 | 51.81 | 149.13 | 90.0 | 95.1 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.98086
Sweep:
SWEEP1
Files:
/programs/datagrid/874/BI1917_3_####.cbf
Images:
1 - 1440
Beam:
(224.22, 212.54) -> (224.22, 212.58)
Distance:
241.95 -> 241.27
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.2 | 3.26 | 1.2 |
| Low resolution limit | 148.57 | 149.73 | 1.22 |
| Completeness | 89.7 | 100.0 | 40.9 |
| Multiplicity | 6.0 | 6.6 | 3.5 |
| I/sigma | 9.2 | 73.3 | 0.1 |
| Rmerge | 0.066 | 0.025 | 2.313 |
| CC half | 0.999 | 0.999 | 0.329 |
| Anomalous completeness | 88.8 | 100.0 | 40.0 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 47.052 | 51.811 | 149.166 | 90.0 | 95.106 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
