X-Ray Diffraction data from Mycobacterial methylmannose polysaccharide mannosyltransferase, source of 7QSG structure

Data DOI: 10.15785/SBGRID/873 | ID: 873

Publication DOI: 10.1038/s42003-023-04448-3

7QSG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: 24 Jan 2023

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/873

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/873 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/873 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/873 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/873 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 873 ; shasum -c files.sha'

Storage requirements: 4.7G

Biological Sample:

Mycobacterial methylmannose polysaccharide mannosyltransferase

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

BL13-XALOC ALBA

Data Creation Date:

15 Oct 2016

Related Datasets:

None


Cite this Dataset

Manso, JA; Ripoll-Rozada, J; Pereira, P. 2023. "X-Ray Diffraction data for: Mycobacterial methylmannose polysaccharide mannosyltransferase. PDB Code 7QSG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/873.

Download Citation

Dataset Description

X-Ray Diffraction data from M. hassiacum ManT, source of 7QSG structure

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Jose A MansoData CollectorIBMC - Instituto de Biologia Molecular e Celular
Jorge Ripoll-RozadaData CollectorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0332

Sweep:

SWEEP1

Files:

/programs/datagrid/873/ba3353_2_####.cbf

Images:

1 - 800

Beam:

(224.71, 211.19) -> (224.71, 211.25)

Distance:

474.91 -> 473.85

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.71 7.33 2.71
Low resolution limit 34.35 34.35 2.76
Completeness 99.3 94.8 99.7
Multiplicity 3.7 3.4 3.7
I/sigma 10.0 31.0 0.6
Rmerge 0.054 0.022 2.195
CC half 0.999 0.999 0.272
Anomalous completeness 93.2 80.9 94.0
Anomalous multiplicity 2.0 2.0 2.0
Cell 136.52 77.55 202.7 90.0 106.45 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0332

Sweep:

SWEEP1

Files:

/programs/datagrid/873/ba3353_2_####.cbf

Images:

1 - 800

Beam:

(224.71, 211.19) -> (224.71, 211.25)

Distance:

474.91 -> 474.57

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.72 7.38 2.72
Low resolution limit 68.15 68.17 2.77
Completeness 99.3 94.5 99.7
Multiplicity 3.7 3.4 3.8
I/sigma 10.2 31.2 0.6
Rmerge 0.054 0.021 2.152
CC half 0.999 0.999 0.278
Anomalous completeness 93.2 80.0 95.3
Anomalous multiplicity 2.0 2.0 2.0
Cell 136.51 77.55 202.69 90.0 106.45 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0332

Sweep:

SWEEP1

Files:

/programs/datagrid/873/ba3353_2_####.cbf

Images:

1 - 800

Beam:

(224.71, 211.19) -> (224.71, 211.25)

Distance:

474.91 -> 475.09

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.57 6.98 2.57
Low resolution limit 68.06 68.08 2.62
Completeness 99.8 99.9 97.1
Multiplicity 3.8 3.6 3.9
I/sigma 10.9 55.8 0.2
Rmerge 0.066 0.03 2.713
CC half 0.978 0.969 0.296
Anomalous completeness 96.6 98.1 93.9
Anomalous multiplicity 2.0 2.0 2.0
Cell 136.329 77.58 202.486 90.0 106.409 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.