Limited Operations 2024/02/27 7AM ET - 10AM ET

The SBDB will be operating at a reduced level between 7AM and 10AM 2024/02/27 due to underlying system maintance. New dataset registrations, dataset depositions, downloads of published datasets from HMS, deposition credential requests, and other inquiries will be unavailable during this maintance.

X-Ray Diffraction data from E. coli CapH C-terminal domain, source of 7T5W structure

Data DOI: 10.15785/SBGRID/867 | ID: 867

7T5W Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: Sept. 9, 2022

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/867

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/867 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/867 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/867 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/867 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 867 ; shasum -c files.sha'

Storage requirements: 4.2G

Biological Sample:

E. coli CapH C-terminal domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS beamline 5.0.2

Data Creation Date:

May 14, 2021

Related Datasets:

None


Cite this Dataset

Lau, RK; Corbett, KD. 2022. "X-Ray Diffraction data for: E. coli CapH C-terminal domain. PDB Code 7T5W", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/867.

Download Citation

Dataset Description

Native data

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego
Rebecca K LauData CollectorUC San Diego
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.00004

Sweep:

SWEEP1

Files:

/programs/datagrid/867/10_11_3_#####.cbf

Images:

1 - 720

Beam:

(220.85, 213.37) -> (220.85, 213.66)

Distance:

275.0 -> 281.41

Spacegroup:

P 2 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.21 3.27 1.21
Low resolution limit 13.03 13.03 1.23
Completeness 65.0 98.2 1.5
Multiplicity 3.6 4.4 1.0
I/sigma 0.1 0.6 0.0
Rmerge 1.033 0.767 0.0
CC half 0.234 0.161 0.0
Anomalous completeness 46.2 87.2 0.0
Anomalous multiplicity 2.2 2.2 2.2
Cell 38.36 43.69 48.71 90.0 90.0 90.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.