X-Ray Diffraction data from Bai1 TSR3 domain, source of 7R85 structure

Data DOI: 10.15785/SBGRID/858 | ID: 858

Publication DOI: 10.1016/j.cell.2021.10.016

7R85 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Garcia Laboratory, Stanford University

Release Date: Nov. 9, 2021

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/858

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/858 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/858 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/858 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/858 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 858 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

Bai1 TSR3 domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL beamline 12-2

Data Creation Date:

April 8, 2019

Related Datasets:

None


Cite this Dataset

Jude, KM; Garcia, KC; Miao, Y; Garcia, K. 2021. "X-Ray Diffraction data for: Bai1 TSR3 domain. PDB Code 7R85", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/858.

Download Citation

Dataset Description

native dataset, P4222 crystal form

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin M JudeData Collector, DepositorHHMI/Stanford University
K C GarciaHHMI/Stanford University
Yi MiaoStanford University
K. Christopher GarciaPIStanford University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/858/1720-14_14_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 212.01)

Distance:

225.0 -> 225.42

Spacegroup:

P 42 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.42 3.85 1.42
Low resolution limit 21.95 21.96 1.44
Completeness 100.0 100.0 99.7
Multiplicity 12.1 10.3 12.4
I/sigma 15.7 38.6 0.4
Rmerge 0.059 0.045 8.055
CC half 0.995 0.994 0.32
Anomalous completeness 99.9 99.5 99.4
Anomalous multiplicity 6.7 6.7 6.7
Cell 43.91 43.91 64.31 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/858/1720-14_14_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 212.0)

Distance:

225.0 -> 225.24

Spacegroup:

P 42 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.41 3.83 1.41
Low resolution limit 36.26 36.28 1.43
Completeness 100.0 100.0 99.7
Multiplicity 12.1 10.3 12.3
I/sigma 15.3 38.5 0.4
Rmerge 0.059 0.045 9.137
CC half 0.995 0.993 0.216
Anomalous completeness 99.9 99.5 99.4
Anomalous multiplicity 6.7 6.7 6.7
Cell 43.91 43.91 64.31 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/858/1720-14_14_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 212.01)

Distance:

225.0 -> 225.7

Spacegroup:

P 42 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.36 3.69 1.36
Low resolution limit 43.93 43.95 1.38
Completeness 100.0 100.0 100.0
Multiplicity 12.2 11.1 12.6
I/sigma 6.3 45.8 0.0
Rmerge 0.074 0.056 4.035
CC half 0.99 0.984 0.104
Anomalous completeness 100.0 100.0 100.0
Anomalous multiplicity 6.7 6.7 6.7
Cell 43.931 43.931 64.333 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.