X-Ray Diffraction data from Bai1-RTN4R complex, source of 7R86 structure

Data DOI: 10.15785/SBGRID/856 | ID: 856

Publication DOI: 10.1016/j.cell.2021.10.016

7R86 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Garcia Laboratory, Stanford University

Release Date: Nov. 9, 2021

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/856

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/856 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/856 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/856 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/856 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 856 ; shasum -c files.sha'

Storage requirements: 7.0G

Biological Sample:

Bai1-RTN4R complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL beamline 12-2

Data Creation Date:

April 8, 2019

Related Datasets:

None


Cite this Dataset

Jude, KM; Garcia, KC; Miao, Y; Garcia, K. 2021. "X-Ray Diffraction data for: Bai1-RTN4R complex. PDB Code 7R86", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/856.

Download Citation

Dataset Description

native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin M JudeData Collector, DepositorHHMI/Stanford University
K C GarciaHHMI/Stanford University
Yi MiaoStanford University
K. Christopher GarciaPIStanford University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/856/1723-4_13_#####.cbf

Images:

1 - 1200

Beam:

(217.32, 211.82) -> (217.32, 211.93)

Distance:

300.0 -> 301.41

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.62 4.39 1.62
Low resolution limit 31.78 31.78 1.65
Completeness 98.3 98.5 98.6
Multiplicity 4.6 4.6 4.7
I/sigma 10.3 35.3 0.8
Rmerge 0.075 0.026 1.627
CC half 0.996 0.997 0.33
Anomalous completeness 95.9 95.3 95.4
Anomalous multiplicity 2.4 2.4 2.4
Cell 63.48 95.33 69.7 90.0 105.39 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/856/1723-4_13_#####.cbf

Images:

1 - 1200

Beam:

(217.32, 211.82) -> (217.32, 211.95)

Distance:

300.0 -> 300.98

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.62 4.4 1.62
Low resolution limit 40.24 40.25 1.65
Completeness 98.3 98.6 98.6
Multiplicity 4.6 4.6 4.7
I/sigma 10.3 35.4 0.8
Rmerge 0.075 0.026 1.621
CC half 0.996 0.996 0.335
Anomalous completeness 95.9 95.5 95.5
Anomalous multiplicity 2.4 2.4 2.4
Cell 63.48 95.33 69.69 90.0 105.39 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/856/1723-4_13_#####.cbf

Images:

1 - 1200

Beam:

(217.32, 211.82) -> (217.32, 211.95)

Distance:

300.0 -> 301.28

Spacegroup:

P 1 21 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.56 4.23 1.56
Low resolution limit 46.16 46.18 1.59
Completeness 96.2 97.7 86.5
Multiplicity 4.3 4.6 3.6
I/sigma 5.2 29.8 0.2
Rmerge 0.086 0.041 1.274
CC half 0.997 0.997 0.316
Anomalous completeness 94.5 97.6 82.8
Anomalous multiplicity 2.2 2.2 2.2
Cell 63.415 95.244 69.65 90.0 105.402 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.