X-Ray Diffraction data from Integrin beta5(743-774)-linker-PAK4cat(D440N/S474E), source of 7S47 structure

Data DOI: 10.15785/SBGRID/854 | ID: 854

Publication DOI: 10.1038/s42003-022-04157-3

7S47 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: Nov. 18, 2022

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/854

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/854 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/854 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/854 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/854 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 854 ; shasum -c files.sha'

Storage requirements: 2.1G

Biological Sample:

Integrin beta5(743-774)-linker-PAK4cat(D440N/S474E)

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24-ID-E

Data Creation Date:

March 30, 2017

Related Datasets:

None


Cite this Dataset

Ha, B; Boggon, TJ. 2022. "X-Ray Diffraction data for: Integrin beta5(743-774)-linker-PAK4cat(D440N/S474E). PDB Code 7S47", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/854.

Download Citation

Dataset Description

Native data

Project Members

Name Additional Roles Affiliation While Working on the Project
Titus J BoggonDepositorYale University
Byung Hak HaData CollectorYale University
Titus BoggonPIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/854/TJB1_P14_1_###.img

Images:

1 - 114

Beam:

(149.77, 156.02) -> (149.77, 156.27)

Distance:

270.0 -> 269.42

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.94 5.26 1.94
Low resolution limit 58.75 58.77 1.97
Completeness 100.0 99.3 100.0
Multiplicity 8.7 7.4 8.8
I/sigma 13.4 36.6 1.0
Rmerge 0.116 0.037 2.806
CC half 0.999 0.999 0.324
Anomalous completeness 99.8 99.7 99.9
Anomalous multiplicity 4.7 4.7 4.7
Cell 62.22 62.22 178.31 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/854/TJB1_P14_1_###.img

Images:

1 - 114

Beam:

(149.77, 156.02) -> (149.77, 156.26)

Distance:

270.0 -> 269.55

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.94 5.26 1.94
Low resolution limit 58.75 58.77 1.97
Completeness 100.0 99.3 100.0
Multiplicity 8.7 7.4 8.8
I/sigma 13.3 36.6 1.0
Rmerge 0.116 0.037 2.817
CC half 0.999 0.999 0.318
Anomalous completeness 99.8 99.7 99.9
Anomalous multiplicity 4.7 4.7 4.7
Cell 62.22 62.22 178.31 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/854/TJB1_P14_1_###.img

Images:

1 - 114

Beam:

(149.77, 156.02) -> (149.77, 156.26)

Distance:

270.0 -> 267.46

Spacegroup:

P 41 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.93 5.23 1.93
Low resolution limit 62.07 62.1 1.96
Completeness 100.0 99.5 99.0
Multiplicity 9.0 8.1 8.6
I/sigma 9.3 41.8 0.4
Rmerge 0.129 0.049 6.757
CC half 0.996 0.993 0.132
Anomalous completeness 99.9 100.0 99.0
Anomalous multiplicity 4.9 4.9 4.9
Cell 62.067 62.067 177.898 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.