Data DOI: 10.15785/SBGRID/844 | ID: 844
7R7J Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Keck Laboratory, University of Wisconsin-Madison
Release Date: 1 Apr 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/844
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/844 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/844 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/844 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/844 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 844 ; shasum -c files.sha'
Storage requirements: 12G
Biological Sample:
Putative DNA repair helicase RadD, with ADP, at 2.03 Angstrom.
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
21-ID-D
Data Creation Date:
4 Jun 2019
Related Datasets:
None
Satyshur, KA; Osorio Garcia, MA; Keck, JL. 2022. "X-Ray Diffraction data for: Putative DNA repair helicase RadD, with ADP, at 2.03 Angstrom.. PDB Code 7R7J", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/844.
Collected at APS on beamline LS-Cat D. 0-360 degrees rotation one degree frames. MARR 300 CCD.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kenneth A Satyshur | Depositor | Senior Scientist |
| Miguel A Osorio Garcia | Data Collector | Graduate Student |
| James L Keck | PI | University of Wisconsin-Madison |
Processed and scaled with HKL2000. Indexing suggested no symmetry, thus P1.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/844/RadD_2_2_6.###
Images:
1 - 360
Beam:
(146.7, 155.25) -> (146.7, 155.04)
Distance:
300.0 -> 292.27
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.08 | 5.64 | 2.08 |
| Low resolution limit | 53.56 | 53.58 | 2.12 |
| Completeness | 96.7 | 94.0 | 94.8 |
| Multiplicity | 3.9 | 3.7 | 3.5 |
| I/sigma | 9.0 | 26.0 | 0.9 |
| Rmerge | 0.085 | 0.033 | 1.419 |
| CC half | 0.996 | 0.995 | 0.289 |
| Anomalous completeness | 91.4 | 81.0 | 92.1 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.36 | 74.1 | 109.05 | 84.61 | 80.07 | 82.71 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/844/RadD_2_2_6.###
Images:
1 - 360
Beam:
(146.7, 155.25) -> (146.7, 155.03)
Distance:
300.0 -> 291.64
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.08 | 5.64 | 2.08 |
| Low resolution limit | 58.52 | 58.54 | 2.12 |
| Completeness | 96.7 | 94.0 | 94.8 |
| Multiplicity | 3.9 | 3.7 | 3.5 |
| I/sigma | 9.0 | 26.0 | 0.9 |
| Rmerge | 0.085 | 0.033 | 1.428 |
| CC half | 0.996 | 0.995 | 0.295 |
| Anomalous completeness | 91.4 | 81.1 | 92.2 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.36 | 74.1 | 109.05 | 84.61 | 80.06 | 82.71 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97856
Sweep:
SWEEP1
Files:
/programs/datagrid/844/RadD_2_2_6.###
Images:
1 - 360
Beam:
(146.7, 155.25) -> (146.7, 155.11)
Distance:
300.0 -> 289.83
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.06 | 5.59 | 2.06 |
| Low resolution limit | 106.96 | 107.1 | 2.1 |
| Completeness | 98.1 | 99.7 | 95.2 |
| Multiplicity | 4.0 | 4.0 | 3.4 |
| I/sigma | 10.4 | 65.7 | 1.5 |
| Rmerge | 0.168 | 0.086 | 1.072 |
| CC half | 0.914 | 0.92 | 0.196 |
| Anomalous completeness | 97.8 | 99.7 | 92.0 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 44.316 | 74.005 | 108.883 | 84.607 | 80.071 | 82.764 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
