X-Ray Diffraction data from bacterial effector vopL in complex with actin, source of 4M63 structure

Data DOI: 10.15785/SBGRID/84 | ID: 84

Publication DOI: 10.1016/j.cell.2013.09.019

4M63 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Rosen Laboratory, UT Southwestern Medical Center

Release Date: May 13, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/84

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/84 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/84 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/84 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/84 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 84 ; shasum -c files.sha'

Storage requirements: 6.4G

Biological Sample:

bacterial effector vopL in complex with actin

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

beamline 19-ID, APS, Chicago Illinois

Data Creation Date:

Aug. 5, 2014

Related Datasets:

None


Cite this Dataset

Zahm, JA; Chen, Z; Chen, Z; Henry, L; Padrick, SB; Pak, CW; Tomchick, DR; Yunus, AA; Rosen, MK. 2015. "X-Ray Diffraction data for: bacterial effector vopL in complex with actin. PDB Code 4M63", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/84.

Download Citation

Dataset Description

Native Dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Jacob A ZahmData Collector, DepositorUT Southwestern, Howard Hughes Medical Institute
Zhe ChenUT Southwestern
Zucheng Chen School of Life Science, Tsinghua University, Beijing 100084, China
Lisa HenryUT Southwestern and Howard Hughes Medical Institute
Shae B PadrickUT Southwestern and Howard Hughes Medical Institute
Chi W PakUT Southwestern and Howard Hughes Medical Institute
Michael K RosenUT Southwestern and Howard Hughes Medical Institute
Diana R TomchickUT Southwestern
Ali A YunusUT Southwestern and Howard Hughes Medical Institute
Michael RosenPIUT Southwestern Medical Center and Howard Hughes Medical Institute

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97931

Sweep:

SWEEP1

Files:

/programs/datagrid/84/JZ12DS.####.img

Images:

1 - 360

Beam:

(154.78, 160.27) -> (154.78, 161.77)

Distance:

378.74 -> 380.55

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.71 7.35 2.71
Low resolution limit 55.06 55.07 2.76
Completeness 98.9 94.0 99.7
Multiplicity 3.7 3.5 3.8
I/sigma 12.0 33.9 1.0
Rmerge 0.05 0.019 1.261
CC half 0.998 0.998 0.535
Anomalous completeness 85.7 84.0 84.1
Anomalous multiplicity 2.0 2.0 2.0
Cell 287.79 66.19 103.28 90.0 94.01 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97931

Sweep:

SWEEP1

Files:

/programs/datagrid/84/JZ12DS.####.img

Images:

1 - 360

Beam:

(154.78, 160.27) -> (154.78, 161.77)

Distance:

378.74 -> 380.37

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.74 7.43 2.74
Low resolution limit 55.06 55.07 2.79
Completeness 98.9 94.0 99.5
Multiplicity 3.7 3.5 3.8
I/sigma 12.4 34.0 1.3
Rmerge 0.049 0.019 1.045
CC half 0.999 0.998 0.638
Anomalous completeness 85.7 83.7 84.6
Anomalous multiplicity 2.0 2.0 2.0
Cell 287.79 66.19 103.28 90.0 94.01 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97931

Sweep:

SWEEP1

Files:

/programs/datagrid/84/JZ12DS.####.img

Images:

1 - 360

Beam:

(154.78, 160.27) -> (154.78, 161.75)

Distance:

378.74 -> 382.09

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.72 7.37 2.72
Low resolution limit 54.49 54.5 2.77
Completeness 99.7 99.6 94.9
Multiplicity 3.7 3.5 3.6
I/sigma 9.8 28.5 1.2
Rmerge 0.055 0.031 0.953
CC half 0.994 0.991 0.607
Anomalous completeness 90.1 97.3 79.5
Anomalous multiplicity 2.0 2.0 2.0
Cell 288.28 66.225 103.378 90.0 94.005 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.