Data DOI: 10.15785/SBGRID/84 | ID: 84
Publication DOI: 10.1016/j.cell.2013.09.019
4M63 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Rosen Laboratory, UT Southwestern Medical Center
Release Date: 13 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/84
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/84 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/84 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/84 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/84 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 84 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
bacterial effector vopL in complex with actin
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 19-ID, APS, Chicago Illinois
Data Creation Date:
5 Aug 2014
Related Datasets:
None
Zahm, JA; Chen, Z; Chen, Z; Henry, L; Padrick, SB; Pak, CW; Tomchick, DR; Yunus, AA; Rosen, MK. 2015. "X-Ray Diffraction data for: bacterial effector vopL in complex with actin. PDB Code 4M63", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/84.
Native Dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jacob A Zahm | Data Collector, Depositor | UT Southwestern, Howard Hughes Medical Institute |
| Zhe Chen | UT Southwestern | |
| Zucheng Chen | School of Life Science, Tsinghua University, Beijing 100084, China | |
| Lisa Henry | UT Southwestern and Howard Hughes Medical Institute | |
| Shae B Padrick | UT Southwestern and Howard Hughes Medical Institute | |
| Chi W Pak | UT Southwestern and Howard Hughes Medical Institute | |
| Michael K Rosen | UT Southwestern and Howard Hughes Medical Institute | |
| Diana R Tomchick | UT Southwestern | |
| Ali A Yunus | UT Southwestern and Howard Hughes Medical Institute | |
| Michael Rosen | PI | UT Southwestern Medical Center and Howard Hughes Medical Institute |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97931
Sweep:
SWEEP1
Files:
/programs/datagrid/84/JZ12DS.####.img
Images:
1 - 360
Beam:
(154.78, 160.27) -> (154.78, 161.77)
Distance:
378.74 -> 381.13
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.61 | 7.08 | 2.61 |
| Low resolution limit | 55.06 | 55.07 | 2.66 |
| Completeness | 99.1 | 94.9 | 99.8 |
| Multiplicity | 3.7 | 3.4 | 3.8 |
| I/sigma | 10.9 | 33.4 | 0.7 |
| Rmerge | 0.055 | 0.019 | 1.932 |
| CC half | 0.998 | 0.998 | 0.349 |
| Anomalous completeness | 85.5 | 84.4 | 83.3 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 287.81 | 66.19 | 103.29 | 90.0 | 94.01 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97931
Sweep:
SWEEP1
Files:
/programs/datagrid/84/JZ12DS.####.img
Images:
1 - 360
Beam:
(154.78, 160.27) -> (154.78, 161.77)
Distance:
378.74 -> 380.42
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.61 | 7.08 | 2.61 |
| Low resolution limit | 64.5 | 64.52 | 2.66 |
| Completeness | 99.1 | 94.9 | 99.9 |
| Multiplicity | 3.7 | 3.4 | 3.8 |
| I/sigma | 10.9 | 33.3 | 0.7 |
| Rmerge | 0.055 | 0.019 | 1.917 |
| CC half | 0.998 | 0.998 | 0.354 |
| Anomalous completeness | 85.5 | 84.4 | 83.2 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 287.81 | 66.19 | 103.29 | 90.0 | 94.02 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97931
Sweep:
SWEEP1
Files:
/programs/datagrid/84/JZ12DS.####.img
Images:
1 - 360
Beam:
(154.78, 160.27) -> (154.78, 161.75)
Distance:
378.74 -> 381.98
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.54 | 6.89 | 2.54 |
| Low resolution limit | 55.09 | 55.1 | 2.58 |
| Completeness | 99.9 | 100.0 | 98.8 |
| Multiplicity | 3.8 | 3.6 | 3.6 |
| I/sigma | 12.0 | 78.9 | 0.2 |
| Rmerge | 0.077 | 0.046 | 2.18 |
| CC half | 0.969 | 0.94 | 0.329 |
| Anomalous completeness | 90.5 | 98.8 | 84.9 |
| Anomalous multiplicity | 2.0 | 2.0 | 2.0 |
| Cell | 288.203 | 66.221 | 103.358 | 90.0 | 94.011 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
